Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BLDA23_RS22540 Genome accession   NZ_CP031126
Coordinates   4312841..4313548 (-) Length   235 a.a.
NCBI ID   WP_009329989.1    Uniprot ID   -
Organism   Bacillus licheniformis strain 0DA23-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4307841..4318548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLDA23_RS22520 (BLDA23_22520) - 4307884..4308972 (-) 1089 WP_003177863.1 acyltransferase family protein -
  BLDA23_RS22525 (BLDA23_22525) - 4309120..4311006 (-) 1887 WP_011198462.1 ABC transporter permease -
  BLDA23_RS22530 (BLDA23_22530) - 4310981..4311745 (-) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  BLDA23_RS22535 (BLDA23_22535) - 4311837..4312844 (-) 1008 WP_003177867.1 sensor histidine kinase -
  BLDA23_RS22540 (BLDA23_22540) braR 4312841..4313548 (-) 708 WP_009329989.1 response regulator transcription factor Regulator
  BLDA23_RS22545 (BLDA23_22545) - 4313731..4314102 (+) 372 WP_003177872.1 YxeA family protein -
  BLDA23_RS22550 (BLDA23_22550) - 4314131..4315816 (-) 1686 WP_009329990.1 methyl-accepting chemotaxis protein -
  BLDA23_RS22555 (BLDA23_22555) - 4315943..4317367 (-) 1425 WP_021837835.1 sodium:alanine symporter family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27071.02 Da        Isoelectric Point: 4.9777

>NTDB_id=262238 BLDA23_RS22540 WP_009329989.1 4312841..4313548(-) (braR) [Bacillus licheniformis strain 0DA23-1]
MQKVMIVEDDPKIADLLKLHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=262238 BLDA23_RS22540 WP_009329989.1 4312841..4313548(-) (braR) [Bacillus licheniformis strain 0DA23-1]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATTGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.462

94.894

0.374