Detailed information NTG0262184

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BLDA23_RS13350
• Genome accession: NZ_CP031126
• Coordinates: 2552622..2553752 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain 0DA23-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2547622..2558752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLDA23_RS13330 (BLDA23_13330)	-	2548811..2549155 (-)	345	WP_003183123.1	hypothetical protein	-
BLDA23_RS13335 (BLDA23_13335)	-	2549418..2551604 (-)	2187	WP_003183125.1	RNA ligase	-
BLDA23_RS13340 (BLDA23_13340)	-	2551731..2552168 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
BLDA23_RS13345 (BLDA23_13345)	-	2552327..2552632 (-)	306	WP_003183128.1	hypothetical protein	-
BLDA23_RS13350 (BLDA23_13350)	rapC	2552622..2553752 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
BLDA23_RS13355 (BLDA23_13355)	-	2553983..2554420 (-)	438	WP_080626940.1	peptidylprolyl isomerase	-
BLDA23_RS13360 (BLDA23_13360)	-	2554757..2555653 (+)	897	WP_011198086.1	DUF1002 domain-containing protein	-
BLDA23_RS13365 (BLDA23_13365)	-	2555650..2556510 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
BLDA23_RS13370 (BLDA23_13370)	lysA	2556749..2558068 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=262184 BLDA23_RS13350 WP_009327959.1 2552622..2553752(-) (rapC) [Bacillus licheniformis strain 0DA23-1]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=262184 BLDA23_RS13350 WP_009327959.1 2552622..2553752(-) (rapC) [Bacillus licheniformis strain 0DA23-1]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452