Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | CAB17_RS15225 | Genome accession | NZ_CP025491 |
| Coordinates | 3512400..3513089 (-) | Length | 229 a.a. |
| NCBI ID | WP_101898928.1 | Uniprot ID | A0A2H5FI02 |
| Organism | Legionella sainthelensi strain LA01-117 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3507400..3518089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAB17_RS15200 (CAB17_03110) | pyk | 3507682..3509100 (+) | 1419 | WP_101898925.1 | pyruvate kinase | - |
| CAB17_RS15210 (CAB17_03120) | - | 3509421..3509909 (+) | 489 | WP_101898926.1 | hypothetical protein | - |
| CAB17_RS15215 (CAB17_03125) | - | 3510303..3510968 (+) | 666 | WP_027270566.1 | hypothetical protein | - |
| CAB17_RS15220 (CAB17_03130) | - | 3511085..3512206 (+) | 1122 | WP_101898927.1 | hypothetical protein | - |
| CAB17_RS15225 (CAB17_03135) | rocC | 3512400..3513089 (-) | 690 | WP_101898928.1 | ProQ/FinO family protein | Regulator |
| CAB17_RS15230 (CAB17_03140) | - | 3513381..3513587 (+) | 207 | WP_035905888.1 | hypothetical protein | - |
| CAB17_RS15235 (CAB17_03145) | dapB | 3513606..3514337 (+) | 732 | WP_101898929.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| CAB17_RS15240 (CAB17_03150) | - | 3514378..3516852 (-) | 2475 | WP_101898930.1 | oxidoreductase | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 25742.57 Da Isoelectric Point: 10.4497
>NTDB_id=261998 CAB17_RS15225 WP_101898928.1 3512400..3513089(-) (rocC) [Legionella sainthelensi strain LA01-117]
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAAHFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSAEEAEYAAAKIKKRVEKSARNARKLLAEKTVNPSSPNPQGMSYHSKITNQS
SNTTDDHFPIYPTRASYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKEIIEE
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAAHFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSAEEAEYAAAKIKKRVEKSARNARKLLAEKTVNPSSPNPQGMSYHSKITNQS
SNTTDDHFPIYPTRASYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKEIIEE
Nucleotide
Download Length: 690 bp
>NTDB_id=261998 CAB17_RS15225 WP_101898928.1 3512400..3513089(-) (rocC) [Legionella sainthelensi strain LA01-117]
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAGAAAAATAAGTCTAAAAAAGCGCGAACAGA
TGCTTTGTTATGGCTCGCTGCACATTTTCCTGCAGCATTTGATAATTCATTACGAATTCGCCCATTAAAAATAGGTATTA
TGGATGATATTTTGCTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTAAGAGAGGCTGTGGTGTTA
TTTACTCGCCGCCTTGATTATTTAGCTTGCCTCAAGCTTCGAGAAATGCGAATTGATTTGCAAGGCAATGATGTGGGTGA
GGTGAGTGCTGAGGAAGCTGAATATGCAGCTGCCAAGATTAAAAAACGTGTTGAAAAAAGTGCTCGTAATGCACGTAAAC
TTCTCGCAGAAAAAACTGTAAATCCTTCTAGTCCTAATCCTCAAGGCATGAGTTATCACTCAAAAATAACAAATCAGTCA
TCAAACACAACAGATGATCATTTTCCAATTTATCCAACACGAGCTAGTTACAATGCATTGAATGCAACGACACAACCTGT
TCGAACTACTGCTGTAGTGGTAAAGCATAAATCGGCAAAACAATATGATCCTGATGCTGTCGCTCGTTTGAAAGAAAAAT
TAGGATTGTCTAGAAATTCCGAAGAGAAAAAAGAAATTATTGAAGAGTAA
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAGAAAAATAAGTCTAAAAAAGCGCGAACAGA
TGCTTTGTTATGGCTCGCTGCACATTTTCCTGCAGCATTTGATAATTCATTACGAATTCGCCCATTAAAAATAGGTATTA
TGGATGATATTTTGCTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTAAGAGAGGCTGTGGTGTTA
TTTACTCGCCGCCTTGATTATTTAGCTTGCCTCAAGCTTCGAGAAATGCGAATTGATTTGCAAGGCAATGATGTGGGTGA
GGTGAGTGCTGAGGAAGCTGAATATGCAGCTGCCAAGATTAAAAAACGTGTTGAAAAAAGTGCTCGTAATGCACGTAAAC
TTCTCGCAGAAAAAACTGTAAATCCTTCTAGTCCTAATCCTCAAGGCATGAGTTATCACTCAAAAATAACAAATCAGTCA
TCAAACACAACAGATGATCATTTTCCAATTTATCCAACACGAGCTAGTTACAATGCATTGAATGCAACGACACAACCTGT
TCGAACTACTGCTGTAGTGGTAAAGCATAAATCGGCAAAACAATATGATCCTGATGCTGTCGCTCGTTTGAAAGAAAAAT
TAGGATTGTCTAGAAATTCCGAAGAGAAAAAAGAAATTATTGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
65.975 |
100 |
0.694 |