Detailed information NTG0261993

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CAB17_RS11520
• Genome accession: NZ_CP025491
• Coordinates: 2635480..2636043 (+)
• Length: 187 a.a.
• NCBI ID: WP_244940880.1
• Uniprot ID: -
• Organism: Legionella sainthelensi strain LA01-117
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2630480..2641043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAB17_RS11500 (CAB17_18180)	-	2631037..2632536 (-)	1500	WP_101901251.1	ArnT family glycosyltransferase	-
CAB17_RS11510 (CAB17_18190)	-	2632877..2634247 (+)	1371	WP_101901253.1	hypothetical protein	-
CAB17_RS11515 (CAB17_18195)	-	2634556..2635410 (+)	855	WP_244941062.1	polysaccharide deacetylase family protein	-
CAB17_RS11520 (CAB17_18200)	fimT	2635480..2636043 (+)	564	WP_244940880.1	GspH/FimT family protein	Machinery gene
CAB17_RS11525 (CAB17_18205)	pilV	2636056..2636601 (+)	546	WP_101901256.1	type IV pilus modification protein PilV	-
CAB17_RS11530 (CAB17_18210)	-	2636598..2637665 (+)	1068	WP_101901257.1	PilW family protein	-
CAB17_RS11535 (CAB17_18215)	-	2637785..2638231 (+)	447	WP_164838713.1	pilus assembly PilX family protein	-

Sequence

Protein

• Length: 187 a.a.
• Molecular weight: 19912.99 Da
• Isoelectric Point: 6.8758

>NTDB_id=261993 CAB17_RS11520 WP_244940880.1 2635480..2636043(+) (fimT) [Legionella sainthelensi strain LA01-117]
MDLVQIRDRTLKFIITTKQGFTLIELLITLLVLCILLVIAVPALSTLLMNNRLIAKTDIFVNSLNYARNTALGESINVVV
CPFGVAQSTTCGGNWSNGWIVVTQPSVGTSSLLQSQQLFSADPVLSSNVASVIFDPHGLTTTSGNFKFCDSRGGAFARSV
EVLATGFVQSSATPGQAVWDNSALTCP

Nucleotide

• Length: 564 bp

>NTDB_id=261993 CAB17_RS11520 WP_244940880.1 2635480..2636043(+) (fimT) [Legionella sainthelensi strain LA01-117]
GTGGATTTAGTTCAAATCAGGGATCGAACTTTGAAGTTCATAATAACAACCAAGCAAGGGTTCACATTAATTGAGCTCTT
AATCACATTATTAGTTCTTTGTATTTTATTAGTTATAGCAGTGCCAGCATTGAGCACTCTGCTAATGAATAATCGTTTAA
TTGCTAAAACAGATATATTCGTAAATTCACTTAATTATGCCCGCAATACCGCTTTAGGTGAGTCAATCAACGTTGTAGTA
TGTCCTTTTGGTGTGGCTCAATCGACAACATGTGGTGGAAATTGGAGCAATGGATGGATTGTGGTCACTCAACCTTCTGT
AGGTACGAGTTCATTATTACAAAGCCAGCAACTTTTTTCTGCAGATCCGGTGCTTTCAAGTAATGTAGCCAGCGTGATTT
TTGATCCACATGGATTGACAACAACATCAGGTAATTTTAAGTTCTGCGACAGTAGAGGTGGAGCATTCGCTCGCTCAGTA
GAAGTATTGGCAACTGGATTCGTTCAATCAAGCGCAACCCCTGGCCAGGCGGTGTGGGATAACAGCGCACTTACATGTCC
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (18-40)

• Type II transport protein GspH (GspH) (60-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	61.31	89.84	0.551