Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   CAB17_RS03120 Genome accession   NZ_CP025491
Coordinates   709089..710348 (+) Length   419 a.a.
NCBI ID   WP_115704044.1    Uniprot ID   -
Organism   Legionella sainthelensi strain LA01-117     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 704089..715348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAB17_RS03110 (CAB17_09735) - 704629..706290 (-) 1662 WP_174714448.1 autotransporter assembly complex protein TamA -
  CAB17_RS03115 (CAB17_09740) mutS 706387..708924 (-) 2538 WP_101899943.1 DNA mismatch repair protein MutS -
  CAB17_RS03120 (CAB17_09745) lqsT 709089..710348 (+) 1260 WP_115704044.1 sensor histidine kinase Regulator
  CAB17_RS03125 (CAB17_09750) - 710592..711308 (-) 717 WP_101899944.1 iron-containing redox enzyme family protein -
  CAB17_RS03130 (CAB17_09755) - 711495..712865 (+) 1371 WP_101899945.1 glutamine synthetase family protein -
  CAB17_RS03135 (CAB17_09760) - 713036..714424 (+) 1389 WP_101899946.1 aldehyde dehydrogenase family protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 48392.87 Da        Isoelectric Point: 8.5186

>NTDB_id=261979 CAB17_RS03120 WP_115704044.1 709089..710348(+) (lqsT) [Legionella sainthelensi strain LA01-117]
MKRLKESLLIIYQYLSKQTEDASHQITLFGIVMMINYPLFGVFWKFESFQLSEEFCLRLIATFLCACLALNRFWPRFLLK
WLPVFWYLVLLFCLPYFFCYLTLINHCSTLWLMNCVSAIFFLLLVTSALGSLILIFGGCGLAFFSYFLTHRVMEYIPGTI
SLFSLSMTCVAAAVIGVLFARDREIIIAGRLSGMRMFASSIAHDLRTPLASIYLQAELQGIILNKIKNSEIRNDLQESLN
KITRGIETSNRIISMQLSNIRHNKFNTSNFSIYPIHNLIERAVDDYPLKETQKSLIHVNYENNFSIWLEELAFKNLLWNL
LKNSLEYIEETGKGIISIWLEIGVGKDNFNYLHVKDTARGIYSKNFGKIFERFYSERQNGTGLGLAYCKLLMQEAGGDIF
CKGKLNEFAHFTVKFPKID

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=261979 CAB17_RS03120 WP_115704044.1 709089..710348(+) (lqsT) [Legionella sainthelensi strain LA01-117]
ATGAAGCGGTTAAAAGAGAGTTTACTTATTATTTATCAATATCTATCGAAGCAGACAGAAGATGCAAGTCACCAAATTAC
ATTATTTGGCATTGTGATGATGATCAACTATCCGTTATTTGGTGTTTTTTGGAAATTCGAAAGTTTTCAACTGAGTGAAG
AGTTTTGTTTACGGCTTATCGCTACTTTTCTTTGTGCTTGTTTGGCTTTAAATCGATTTTGGCCACGTTTCTTATTGAAG
TGGCTACCTGTTTTTTGGTATCTCGTTTTATTATTTTGTTTGCCCTACTTCTTTTGCTATTTAACACTTATCAATCATTG
TTCTACATTGTGGTTAATGAATTGTGTTTCTGCTATTTTTTTTCTTTTATTGGTAACGAGTGCTTTAGGATCTCTTATTC
TCATTTTTGGAGGATGTGGGCTTGCATTTTTCTCTTATTTTCTAACGCACCGGGTTATGGAATATATACCAGGCACCATT
TCATTATTTAGCCTATCGATGACGTGCGTTGCAGCAGCTGTGATTGGTGTTTTGTTCGCTCGGGATAGAGAAATAATTAT
TGCAGGTCGTCTCTCGGGAATGCGTATGTTCGCGAGCAGTATTGCACATGATCTGCGTACACCACTAGCGAGTATTTATT
TGCAAGCTGAGTTACAGGGAATTATTTTGAATAAAATCAAAAACTCCGAGATACGAAACGATTTGCAAGAAAGTTTGAAT
AAGATTACTCGTGGGATAGAAACCAGTAATCGCATCATTAGCATGCAGTTAAGTAATATACGCCATAATAAGTTCAACAC
AAGTAATTTTAGTATTTACCCAATCCATAATTTAATTGAAAGGGCTGTCGATGATTATCCATTAAAAGAAACACAAAAGT
CGCTTATTCATGTTAATTATGAAAATAATTTCTCCATTTGGTTAGAAGAGTTAGCGTTTAAGAATCTCCTATGGAATTTA
TTAAAAAATAGTCTTGAGTACATTGAAGAAACGGGTAAGGGTATTATCTCTATTTGGTTGGAAATTGGTGTTGGAAAAGA
TAATTTCAATTACCTTCACGTTAAGGATACAGCTCGAGGAATCTACTCTAAAAATTTCGGAAAAATATTTGAACGCTTCT
ACTCTGAACGTCAAAATGGTACGGGTTTAGGGCTGGCTTATTGCAAATTGCTGATGCAAGAAGCAGGCGGTGATATTTTT
TGTAAGGGGAAATTAAATGAATTTGCTCATTTTACTGTAAAATTTCCTAAAATTGATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(195-254)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(311-416)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

71.19

100

0.714

Multiple sequence alignment