Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | CYK59_RS09440 | Genome accession | NZ_CP025476 |
| Coordinates | 1804445..1805152 (+) | Length | 235 a.a. |
| NCBI ID | WP_081394487.1 | Uniprot ID | A0A385ABK3 |
| Organism | Latilactobacillus curvatus strain IRG2 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1799445..1810152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYK59_RS09420 (CYK59_09450) | rsgA | 1799622..1800377 (+) | 756 | WP_257784607.1 | ribosome small subunit-dependent GTPase A | - |
| CYK59_RS09425 (CYK59_09455) | fusA | 1801022..1803109 (-) | 2088 | WP_004270213.1 | elongation factor G | - |
| CYK59_RS09430 (CYK59_09460) | rpsG | 1803201..1803671 (-) | 471 | WP_076786307.1 | 30S ribosomal protein S7 | - |
| CYK59_RS09435 (CYK59_09465) | rpsL | 1803761..1804174 (-) | 414 | WP_004270179.1 | 30S ribosomal protein S12 | - |
| CYK59_RS09440 (CYK59_09470) | comC | 1804445..1805152 (+) | 708 | WP_081394487.1 | prepilin peptidase | Machinery gene |
| CYK59_RS09445 (CYK59_09475) | rpoC | 1805225..1808866 (-) | 3642 | WP_076786309.1 | DNA-directed RNA polymerase subunit beta' | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 26588.96 Da Isoelectric Point: 6.9090
>NTDB_id=261914 CYK59_RS09440 WP_081394487.1 1804445..1805152(+) (comC) [Latilactobacillus curvatus strain IRG2]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT
Nucleotide
Download Length: 708 bp
>NTDB_id=261914 CYK59_RS09440 WP_081394487.1 1804445..1805152(+) (comC) [Latilactobacillus curvatus strain IRG2]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGACACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGACACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Latilactobacillus sakei subsp. sakei 23K |
50.661 |
96.596 |
0.489 |