Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   CYK55_RS11740 Genome accession   NZ_CP025473
Coordinates   2413697..2415508 (-) Length   603 a.a.
NCBI ID   WP_034687152.1    Uniprot ID   -
Organism   Enterococcus mundtii strain Pe161     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2408697..2420508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CYK55_RS13885 - 2410231..2410608 (-) 378 WP_241234777.1 ATP-binding cassette domain-containing protein -
  CYK55_RS11730 (CYK55_11820) - 2410660..2411703 (-) 1044 WP_241234778.1 ATP-binding cassette domain-containing protein -
  CYK55_RS11735 (CYK55_11825) - 2412060..2413091 (-) 1032 WP_034687149.1 Zn-dependent alcohol dehydrogenase -
  CYK55_RS11740 (CYK55_11830) pepF 2413697..2415508 (-) 1812 WP_034687152.1 oligoendopeptidase F Regulator
  CYK55_RS11745 (CYK55_11835) - 2415639..2416634 (-) 996 WP_126134356.1 competence protein CoiA family protein -
  CYK55_RS11750 (CYK55_11840) - 2416754..2417404 (-) 651 WP_126134357.1 adaptor protein MecA -
  CYK55_RS11755 (CYK55_11845) spxA 2417567..2417965 (-) 399 WP_019723016.1 transcriptional regulator SpxA -
  CYK55_RS11760 (CYK55_11850) - 2418720..2419442 (+) 723 WP_034687158.1 HAD family hydrolase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 69036.32 Da        Isoelectric Point: 4.7401

>NTDB_id=261847 CYK55_RS11740 WP_034687152.1 2413697..2415508(-) (pepF) [Enterococcus mundtii strain Pe161]
MSETTKLPNREDLPDKLTWDLTPIFSSDQEFDKKYEELTEELKNSEHYKGTLGNGATAFLEALEFVLTMYRKVELIYVYS
HLKNDQDTTNTTYQALYARAGSLLSKVSEAIAWYEPEVLQLSDEQIWQYFEEEPKLEVYRHYVKQMVDNRAHILSADQEA
LLAGAGEIFGASSGTFAVLNNADLEFPTITGENGEKIQLSHGVYGQLLESTNREVREAAFKGLYSVYAQFRNTFASTLGT
HIKGHNFKAKARRYASAREAALSNNHIPESVYDTLVTVVNKHLPLLHRYMELRKRLLNLDTLHMYDLYTPVLGEAPIKFT
YEEAVEKAIESLAPMGEEYLAVVKEAFSNRWIDVVENKGKRSGAYSSGSYDTNPYILMNWHDTLDQLFTLVHEMGHSVHS
YFTRSNQPFVYGDYSIFLAEIASTTNENILTEHLLATEEDPRVRAYVLNHYLDGFKGTIFRQTQFAEFEHFMHQEDAKGT
PLTSEYLSESYGELNAKYYGPAVEKDPEIKDEWARIPHFYYNYYVYQYSTGFSAASALAKKIWEKEPGALDAYLTYLKAG
NSDYPVEVMKKAGVDMTQAAYIEDAMAVFEQRLNELEALVEEL

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=261847 CYK55_RS11740 WP_034687152.1 2413697..2415508(-) (pepF) [Enterococcus mundtii strain Pe161]
ATGAGCGAAACAACGAAGTTACCAAATAGAGAAGATTTGCCTGACAAATTGACATGGGACCTAACACCAATCTTTTCAAG
CGATCAAGAATTTGATAAAAAGTACGAAGAATTGACTGAAGAATTAAAAAATTCTGAGCATTATAAAGGAACATTAGGCA
ATGGAGCAACAGCATTTTTGGAGGCGCTTGAATTTGTCTTAACAATGTATCGTAAAGTTGAGCTTATTTATGTCTATTCC
CATTTAAAAAATGATCAAGATACGACAAATACGACATATCAAGCATTGTATGCTCGTGCTGGAAGTTTACTTTCAAAAGT
GAGTGAAGCAATTGCTTGGTATGAGCCAGAAGTATTGCAACTTTCTGATGAGCAAATTTGGCAATATTTTGAAGAAGAAC
CAAAATTAGAAGTTTATCGTCATTATGTCAAACAAATGGTTGATAACCGCGCACACATCTTGTCAGCAGATCAAGAAGCA
TTACTTGCTGGAGCCGGAGAAATCTTTGGTGCTTCAAGTGGTACCTTTGCAGTGTTGAATAATGCTGATTTAGAGTTCCC
AACAATCACTGGTGAGAATGGTGAAAAGATCCAATTATCGCATGGTGTATATGGTCAATTATTAGAAAGTACAAATCGCG
AAGTACGTGAAGCAGCGTTCAAAGGACTATACAGCGTATATGCACAATTTAGAAACACCTTTGCTTCCACACTTGGAACA
CATATCAAAGGACACAACTTCAAAGCCAAAGCACGTCGATACGCTTCTGCCAGAGAAGCTGCACTAAGCAATAACCATAT
TCCTGAAAGTGTTTATGATACTTTAGTTACTGTTGTGAACAAACATTTGCCGTTATTGCATCGATATATGGAACTACGTA
AACGACTATTAAATTTAGATACGTTGCATATGTATGATCTGTATACGCCAGTATTAGGTGAAGCACCAATCAAATTTACG
TATGAAGAAGCAGTAGAAAAAGCCATTGAATCACTTGCACCAATGGGAGAAGAATATCTAGCTGTCGTAAAAGAAGCATT
TTCAAACCGTTGGATTGATGTAGTCGAGAATAAAGGGAAACGCAGTGGCGCTTATTCTTCTGGTAGTTATGATACCAACC
CTTACATCCTGATGAACTGGCATGATACGTTGGATCAACTGTTCACCTTGGTCCATGAAATGGGACATAGTGTCCACAGC
TATTTCACACGTTCGAATCAACCTTTCGTCTACGGCGACTATTCAATCTTTTTAGCCGAGATTGCGTCAACAACAAATGA
AAATATTTTGACCGAACATTTATTAGCGACCGAAGAAGATCCTCGGGTTCGTGCTTATGTCTTGAATCATTATTTAGATG
GTTTTAAAGGAACAATTTTCCGTCAAACACAATTTGCAGAGTTTGAACACTTCATGCATCAAGAAGATGCAAAAGGAACA
CCTTTGACGAGTGAGTACCTAAGTGAAAGCTATGGCGAATTAAATGCTAAGTATTATGGTCCGGCTGTTGAAAAAGATCC
AGAAATCAAAGATGAATGGGCGCGTATCCCACATTTCTACTATAATTATTATGTCTATCAATACTCAACAGGATTTTCTG
CTGCATCTGCTTTAGCGAAGAAAATCTGGGAGAAAGAACCAGGTGCATTAGATGCTTACCTAACGTATCTAAAAGCAGGA
AACAGCGATTATCCAGTAGAAGTAATGAAGAAAGCTGGTGTGGACATGACCCAAGCAGCTTATATTGAAGATGCAATGGC
CGTGTTTGAACAACGATTAAATGAATTAGAAGCATTAGTGGAAGAATTATAG

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(207-587)

Oligopeptidase F (Peptidase_M3_N)

(117-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

55.556

98.507

0.547

Multiple sequence alignment