Detailed information NTG0261219

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: DS746_RS06195
• Genome accession: NZ_CP030888
• Coordinates: 1177392..1178342 (+)
• Length: 316 a.a.
• NCBI ID: WP_052775522.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CS19
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1172392..1183342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DS746_RS06165 (DS746_1211)	neuB	1172895..1173935 (+)	1041	WP_002922930.1	N-acetylneuraminate synthase	-
DS746_RS06170 (DS746_1212)	neuC	1173932..1175050 (+)	1119	WP_002922931.1	UDP-N-acetylglucosamine 2-epimerase	-
DS746_RS06175 (DS746_1213)	-	1175047..1175712 (+)	666	WP_002922934.1	cytidylyltransferase domain-containing protein	-
DS746_RS06180 (DS746_1214)	-	1175700..1175873 (+)	174	WP_002896733.1	hypothetical protein	-
DS746_RS09440 (DS746_1215)	-	1175915..1176529 (+)	615	WP_269468790.1	CatB-related O-acetyltransferase	-
DS746_RS06190 (DS746_1216)	-	1176521..1177333 (-)	813	WP_002922943.1	glycosyltransferase family 2 protein	-
DS746_RS06195 (DS746_1217)	waaF	1177392..1178342 (+)	951	WP_052775522.1	lipopolysaccharide heptosyltransferase II	Regulator
DS746_RS06200 (DS746_1218)	-	1178328..1179101 (-)	774	WP_220518797.1	glycosyltransferase family 25 protein	-
DS746_RS06205 (DS746_1219)	gmhA	1179101..1179661 (-)	561	WP_002922730.1	D-sedoheptulose 7-phosphate isomerase	-
DS746_RS06210 (DS746_1220)	rfaE1	1179658..1181043 (-)	1386	WP_259831434.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
DS746_RS06215 (DS746_1221)	rfaD	1181036..1181989 (-)	954	WP_002922734.1	ADP-glyceromanno-heptose 6-epimerase	-
DS746_RS06220 (DS746_1222)	gmhB	1181990..1182550 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
DS746_RS06225 (DS746_1223)	-	1182632..1182934 (+)	303	WP_002852762.1	cytochrome c	-
DS746_RS06230 (DS746_1224)	ccoS	1182957..1183163 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36293.94 Da
• Isoelectric Point: 10.3523

>NTDB_id=261219 DS746_RS06195 WP_052775522.1 1177392..1178342(+) (waaF) [Campylobacter jejuni strain CS19]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQTRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=261219 DS746_RS06195 WP_052775522.1 1177392..1178342(+) (waaF) [Campylobacter jejuni strain CS19]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTGAAGTGATTTTAAAAGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.949	99.367	0.934