Detailed information NTG0261146

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: SPSF3K_RS01245
• Genome accession: NZ_CP025420
• Coordinates: 252081..253124 (+)
• Length: 347 a.a.
• NCBI ID: WP_003103717.1
• Uniprot ID: A0A0E2UQ99
• Organism: Streptococcus parauberis strain SPOF3K
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 247081..258124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS01230 (SPSF3K_00254)	-	248377..250035 (+)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-
SPSF3K_RS01235 (SPSF3K_00255)	-	250111..251025 (+)	915	WP_004347295.1	ABC transporter permease	-
SPSF3K_RS01240 (SPSF3K_00256)	-	251035..252066 (+)	1032	WP_004347296.1	ABC transporter permease	-
SPSF3K_RS01245 (SPSF3K_00257)	oppD	252081..253124 (+)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
SPSF3K_RS01250 (SPSF3K_00258)	amiF	253124..254059 (+)	936	WP_003105521.1	ABC transporter ATP-binding protein	Regulator
SPSF3K_RS01255 (SPSF3K_00259)	rnjA	254125..255807 (-)	1683	WP_003107714.1	ribonuclease J1	-
SPSF3K_RS01260 (SPSF3K_00260)	-	255809..256039 (-)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
SPSF3K_RS01265 (SPSF3K_00261)	tsaB	256312..257004 (+)	693	WP_037620071.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SPSF3K_RS01270 (SPSF3K_00262)	rimI	257009..257425 (+)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38344.10 Da
• Isoelectric Point: 5.1351

>NTDB_id=261146 SPSF3K_RS01245 WP_003103717.1 252081..253124(+) (oppD) [Streptococcus parauberis strain SPOF3K]
MTKEKVLSVKDLHVDFKTYAGAVKAIRNINFDLYKGETLAIVGESGSGKSVTTRTLMGLNAKNASITGDIDFKGKKLIEL
NEDEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENVSKSEALERALKLMNQVGIPNAEEHINDYPHMWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEEGSLESIPGTPPDLLNPPKGDAFAARNEYALDIDLEEEPPMFKVSDTHYAATWLL
DERAPQVTPPAPILKRWAKWNKKKGQI

Nucleotide

• Length: 1044 bp

>NTDB_id=261146 SPSF3K_RS01245 WP_003103717.1 252081..253124(+) (oppD) [Streptococcus parauberis strain SPOF3K]
ATGACTAAAGAAAAAGTATTAAGTGTCAAAGACCTCCATGTTGATTTTAAAACATATGCTGGAGCTGTTAAGGCAATCCG
TAATATCAATTTTGATTTATATAAAGGTGAGACACTAGCCATTGTTGGTGAATCAGGTTCTGGTAAATCCGTTACGACAC
GGACTTTGATGGGGCTAAACGCTAAGAATGCAAGTATCACTGGAGATATTGATTTCAAAGGTAAGAAATTAATTGAGCTT
AATGAAGACGAATGGGTTAAAGTTCGTGGTAAAGAAATTGCCATGATTTTCCAAGATCCCATGACAAGTCTTGACCCTAC
AATGAAAATTGGCATGCAGATTGCAGAAGCGATTCTAATCCATGAAAATGTTTCTAAAAGTGAAGCTTTGGAACGTGCAT
TGAAATTGATGAATCAAGTTGGGATTCCAAATGCGGAAGAACATATCAATGATTATCCACATATGTGGTCTGGTGGTATG
CGTCAACGTGCTGTCATTGCTATTGCACTTGCTGCAAATCCAGAAATTTTAATTGCTGACGAACCTACAACTGCCCTAGA
CGTAACAATTCAGAACCAAATTTTGAAATTGATGAAAGGTTTGCAATCACAAATTTCTTCATCAATTATCTTTATCACCC
ATGACCTTGGGGTTGTGGCTGGTATGGCTGATCGTGTAGCTGTTATGTATGCAGGTAAAATTGTTGAATATGGTACAGTA
GATGAAGTTTTCTATAATCCACAACATCCCTACACATGGGGCCTTTTGAACTCTATGCCTACAACTGATACCGAAGAAGG
AAGCCTTGAATCTATTCCAGGGACACCTCCTGACCTGTTGAATCCTCCAAAAGGAGATGCCTTTGCTGCTCGTAATGAGT
ATGCCTTAGATATCGACTTGGAAGAGGAACCTCCTATGTTTAAAGTTTCTGATACACATTACGCTGCAACATGGTTGTTA
GATGAACGTGCACCACAAGTAACACCACCTGCACCAATTTTAAAACGTTGGGCTAAATGGAATAAGAAGAAAGGACAAAT
TTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

3D structure

• AlphaFold DB: A0A0E2UQ99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	77.746	99.712	0.775
amiE	Streptococcus salivarius strain HSISS4	56.083	97.118	0.545
amiE	Streptococcus thermophilus LMG 18311	55.786	97.118	0.542
amiE	Streptococcus thermophilus LMD-9	55.786	97.118	0.542