Detailed information NTG0260935

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: CR921_RS05550
• Genome accession: NZ_CP025399
• Coordinates: 1041366..1042247 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain GABA
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1036366..1047247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CR921_RS05525	vicR	1037072..1037779 (-)	708	WP_101415635.1	response regulator YycF	Regulator
CR921_RS05530	-	1038304..1039071 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
CR921_RS05535	-	1039083..1039916 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
CR921_RS05540	-	1039934..1040632 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
CR921_RS05545	-	1040644..1041294 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
CR921_RS05550	endA	1041366..1042247 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
CR921_RS05555	-	1042309..1042497 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
CR921_RS05560	murA	1042499..1043770 (-)	1272	WP_011681211.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
CR921_RS05565	-	1043840..1044076 (-)	237	WP_002946959.1	DUF1146 family protein	-
CR921_RS05570	galE	1044265..1045278 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
CR921_RS05575	-	1045293..1045796 (-)	504	WP_011681213.1	hypothetical protein	-
CR921_RS05580	-	1045786..1046238 (-)	453	WP_011681214.1	hypothetical protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=260935 CR921_RS05550 WP_011681210.1 1041366..1042247(-) (endA) [Streptococcus thermophilus strain GABA]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=260935 CR921_RS05550 WP_011681210.1 1041366..1042247(-) (endA) [Streptococcus thermophilus strain GABA]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594