Detailed information NTG0026092

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: APECO1_RS17145
• Genome accession: NC_008563
• Coordinates: 3368806..3370011 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli APEC O1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3363806..3375011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APECO1_RS17130 (APECO1_3480)	-	3364321..3365997 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
APECO1_RS17135 (APECO1_3479)	kdsB	3366007..3366747 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
APECO1_RS17140 (APECO1_3478)	-	3366744..3368771 (+)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
APECO1_RS17145 (APECO1_3477)	kpsS	3368806..3370011 (+)	1206	WP_001161829.1	capsule biosynthesis protein	Regulator
APECO1_RS17150 (APECO1_3476)	-	3370161..3371390 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
APECO1_RS17155 (APECO1_3475)	-	3371380..3372528 (-)	1149	WP_000197083.1	DUF6716 putative glycosyltransferase	-
APECO1_RS17160 (APECO1_3473)	neuC	3372521..3373696 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
APECO1_RS17165 (APECO1_3472)	-	3373693..3374949 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=26092 APECO1_RS17145 WP_001161829.1 3368806..3370011(+) (kpsS) [Escherichia coli APEC O1]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=26092 APECO1_RS17145 WP_001161829.1 3368806..3370011(+) (kpsS) [Escherichia coli APEC O1]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389