Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   CYD28_RS01765 Genome accession   NZ_CP025396
Coordinates   384833..385729 (+) Length   298 a.a.
NCBI ID   WP_103416012.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain B     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 379833..390729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CYD28_RS01750 (CYD28_01750) - 380700..381647 (+) 948 WP_103416011.1 LCP family protein -
  CYD28_RS01755 (CYD28_01755) - 381737..383212 (-) 1476 WP_016930640.1 alkaline phosphatase -
  CYD28_RS12850 - 383612..383782 (+) 171 WP_011274728.1 hypothetical protein -
  CYD28_RS12855 - 383968..384132 (+) 165 WP_016930641.1 hypothetical protein -
  CYD28_RS01760 (CYD28_01760) braR 384162..384830 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  CYD28_RS01765 (CYD28_01765) braS 384833..385729 (+) 897 WP_103416012.1 sensor histidine kinase Regulator
  CYD28_RS01770 (CYD28_01770) - 385911..386660 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  CYD28_RS01775 (CYD28_01775) - 386662..388653 (+) 1992 WP_011274733.1 ABC transporter permease -
  CYD28_RS01780 (CYD28_01780) - 388742..389932 (+) 1191 WP_037570974.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34649.22 Da        Isoelectric Point: 6.5863

>NTDB_id=260872 CYD28_RS01765 WP_103416012.1 384833..385729(+) (braS) [Staphylococcus haemolyticus strain B]
MLKAFIKSILNEIIIVITFILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHYVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=260872 CYD28_RS01765 WP_103416012.1 384833..385729(+) (braS) [Staphylococcus haemolyticus strain B]
ATGCTGAAAGCTTTTATTAAATCGATATTAAATGAAATCATTATAGTTATTACATTTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCACGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATTATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.014

97.987

0.617

Multiple sequence alignment