Detailed information NTG0260869

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: CYD28_RS00190
• Genome accession: NZ_CP025396
• Coordinates: 45274..46635 (-)
• Length: 453 a.a.
• NCBI ID: WP_053015794.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain B
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 40274..51635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CYD28_RS00175 (CYD28_00175)	-	41355..42266 (-)	912	WP_049395052.1	pseudouridine-5'-phosphate glycosidase	-
CYD28_RS00180 (CYD28_00180)	-	42250..43359 (-)	1110	WP_048667849.1	carbohydrate kinase	-
CYD28_RS00185 (CYD28_00185)	ccrB	43589..45277 (-)	1689	WP_080363987.1	cassette chromosome recombinase CcrB	Machinery gene
CYD28_RS00190 (CYD28_00190)	ccrA	45274..46635 (-)	1362	WP_053015794.1	cassette chromosome recombinase CcrA	Machinery gene
CYD28_RS00195 (CYD28_00195)	-	46822..47451 (-)	630	Protein_36	hypothetical protein	-
CYD28_RS00200 (CYD28_00200)	-	47460..47798 (+)	339	Protein_37	recombinase family protein	-
CYD28_RS00205 (CYD28_00205)	-	47910..48269 (-)	360	WP_001631039.1	hypothetical protein	-
CYD28_RS00210 (CYD28_00210)	-	48476..48802 (+)	327	WP_000391495.1	ArsR/SmtB family transcription factor	-
CYD28_RS00220 (CYD28_00220)	-	49132..51057 (+)	1926	WP_000790094.1	heavy metal translocating P-type ATPase	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 53046.67 Da
• Isoelectric Point: 9.7863

>NTDB_id=260869 CYD28_RS00190 WP_053015794.1 45274..46635(-) (ccrA) [Staphylococcus haemolyticus strain B]
MEEAIAYVRQSTLKQQSLATQKSLIMDTAKQYGWSNVTFYDDKKTGRHTKRSGYQRMVEAIRSGRCKVLCCYRLNRLHRN
LKNAIQLFEICKTHHITIISVNDGYFNLAKEFDCFRLNILMSLAEMESNNISEQTRNGIREKAKQGKLITTHAPFGYRYR
QSHFIVHEEEAHTVKAVYRWYLQGLGYKKISQHLDNNPNLIPRKPYQVRNILLNPNYCGRVINKYGTFNDIVPPIIDVDT
FEEAQERRIHKQHNRSNSRNKLKRRIKCPYCQSTLTNLTIKKEKHSLRYYVCPKNMNEAYHTCPFKGINAQEFESKVLNT
CKAYCDNQSFHDKLNETVLNVLKHQQMKHRQSHLTQEQLIEKLAQNQIDVATFKRLSADSESEEHSSNYSSSQIAQVIRH
ITKDKLTLETIVPLIDNIIITQTKQLQGIYFKNSPLNIVEQSYLITPERNEVI

Nucleotide

• Length: 1362 bp

>NTDB_id=260869 CYD28_RS00190 WP_053015794.1 45274..46635(-) (ccrA) [Staphylococcus haemolyticus strain B]
ATGGAAGAAGCTATTGCTTATGTACGTCAAAGTACACTCAAACAACAAAGCTTAGCTACTCAAAAATCGCTCATTATGGA
TACCGCTAAGCAATATGGATGGTCTAATGTGACGTTTTATGATGATAAGAAAACAGGTCGACATACAAAACGTTCGGGTT
ATCAAAGGATGGTAGAAGCGATTCGTTCTGGAAGATGTAAAGTATTGTGTTGCTATCGCCTAAATCGGCTCCATCGTAAT
TTGAAAAATGCCATACAACTCTTTGAAATTTGTAAAACGCATCATATCACGATCATCAGTGTTAACGATGGCTATTTTAA
CTTAGCTAAAGAGTTTGATTGTTTTCGCTTAAACATACTTATGAGTCTAGCGGAAATGGAATCTAACAACATCAGCGAAC
AAACGCGAAATGGGATAAGAGAAAAAGCCAAACAAGGCAAGCTAATCACAACTCATGCTCCGTTTGGCTATCGTTATAGA
CAAAGTCATTTTATTGTACATGAAGAAGAAGCCCATACTGTCAAAGCGGTTTATCGCTGGTACTTACAAGGTCTAGGTTA
CAAAAAAATTTCCCAACATTTAGATAACAATCCTAACCTTATTCCTCGTAAGCCCTATCAAGTTCGAAATATTCTCTTGA
ACCCTAACTATTGTGGTCGTGTCATTAATAAATATGGCACGTTTAATGATATCGTTCCACCTATTATTGATGTTGATACA
TTTGAAGAAGCACAAGAGCGTCGTATTCATAAACAACACAATCGATCCAATTCTAGAAATAAGCTAAAGCGACGAATCAA
ATGTCCTTACTGTCAATCAACATTAACAAACTTAACGATAAAAAAAGAGAAACACTCTCTACGTTACTACGTTTGTCCTA
AAAATATGAATGAAGCCTATCATACGTGTCCATTTAAAGGTATCAATGCGCAAGAATTTGAGAGTAAAGTGCTCAATACT
TGTAAAGCATATTGTGACAATCAATCATTTCATGACAAATTAAATGAAACAGTACTAAACGTTCTAAAACACCAACAAAT
GAAACACAGACAATCACATCTAACACAAGAACAACTCATCGAAAAACTGGCACAAAATCAAATTGATGTCGCAACGTTTA
AACGTTTATCTGCTGACTCTGAAAGTGAAGAACATTCCTCTAATTATTCATCTAGTCAAATTGCTCAAGTAATCCGTCAT
ATAACTAAAGATAAATTGACATTAGAAACCATAGTCCCTTTGATTGATAACATCATAATAACGCAAACAAAACAATTACA
AGGAATCTACTTTAAAAACAGTCCACTCAATATCGTTGAACAATCGTATTTAATAACTCCTGAAAGGAATGAAGTAATAT
GA

Domains

Predicted by InterproScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase (Recombinase) (168-248)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	53.95	97.792	0.528
ccrA	Staphylococcus aureus N315	51.242	97.792	0.501