Detailed information NTG0026027

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: SPD_RS08795
• Genome accession: NC_008533
• Coordinates: 1663570..1664529 (+)
• Length: 319 a.a.
• NCBI ID: WP_000777248.1
• Uniprot ID: A0A0H2ZMI3
• Organism: Streptococcus pneumoniae D39
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1658570..1669529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPD_RS08765 (SPD_1644)	-	1658770..1659534 (-)	765	WP_000082887.1	nuclear transport factor 2 family protein	-
SPD_RS08770 (SPD_1645)	-	1659538..1659981 (-)	444	WP_000651443.1	MarR family winged helix-turn-helix transcriptional regulator	-
SPD_RS08775 (SPD_1646)	-	1660663..1660959 (-)	297	WP_000840136.1	bacteriocin immunity protein	-
SPD_RS08780 (SPD_1647)	pepA	1660981..1662045 (-)	1065	WP_000209199.1	glutamyl aminopeptidase	-
SPD_RS08785 (SPD_1648)	galE	1662446..1663147 (+)	702	WP_000167846.1	UDP-glucose 4-epimerase GalE	-
SPD_RS12045	-	1663163..1663273 (+)	111	WP_001108391.1	hypothetical protein	-
SPD_RS08795 (SPD_1649)	ceuB	1663570..1664529 (+)	960	WP_000777248.1	ABC transporter permease	Machinery gene
SPD_RS08800 (SPD_1650)	-	1664519..1665475 (+)	957	WP_001193676.1	iron chelate uptake ABC transporter family permease subunit	-
SPD_RS08805 (SPD_1651)	-	1665472..1666224 (+)	753	WP_000764310.1	ABC transporter ATP-binding protein	-
SPD_RS08810 (SPD_1652)	-	1666320..1667285 (+)	966	WP_000858246.1	siderophore ABC transporter substrate-binding protein	-
SPD_RS08815 (SPD_1653)	yidD	1667510..1667752 (-)	243	WP_000821615.1	membrane protein insertion efficiency factor YidD	-
SPD_RS08820 (SPD_1654)	-	1667752..1668474 (-)	723	WP_001222228.1	pseudouridine synthase	-
SPD_RS08825 (SPD_1655)	scpB	1668461..1669030 (-)	570	WP_000105310.1	SMC-Scp complex subunit ScpB	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 35418.29 Da
• Isoelectric Point: 9.7465

>NTDB_id=26027 SPD_RS08795 WP_000777248.1 1663570..1664529(+) (ceuB) [Streptococcus pneumoniae D39]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide

• Length: 960 bp

>NTDB_id=26027 SPD_RS08795 WP_000777248.1 1663570..1664529(+) (ceuB) [Streptococcus pneumoniae D39]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

• FecCD transport family (FecCD) (10-312)

3D structure

• AlphaFold DB: A0A0H2ZMI3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	37.419	97.179	0.364