Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CSC46_RS19775 | Genome accession | NZ_CP030351 |
| Coordinates | 4195268..4195633 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain AR_460 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4190268..4200633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC46_RS19760 (CSC46_4008) | pilK | 4191612..4192487 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| CSC46_RS19765 (CSC46_4009) | pilJ | 4192548..4194596 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CSC46_RS19770 (CSC46_4010) | - | 4194681..4195217 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CSC46_RS19775 (CSC46_4011) | pilH | 4195268..4195633 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CSC46_RS19780 (CSC46_4012) | pilG | 4195680..4196087 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CSC46_RS19785 (CSC46_4013) | gshB | 4196342..4197295 (+) | 954 | WP_003162014.1 | glutathione synthase | - |
| CSC46_RS19790 (CSC46_4014) | - | 4197442..4198335 (+) | 894 | WP_204360249.1 | energy transducer TonB | - |
| CSC46_RS19795 (CSC46_4015) | - | 4198384..4198953 (+) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| CSC46_RS19800 (CSC46_4016) | ruvX | 4198953..4199387 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CSC46_RS19805 (CSC46_4017) | pyrR | 4199499..4200011 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=260174 CSC46_RS19775 WP_003084587.1 4195268..4195633(-) (pilH) [Pseudomonas aeruginosa strain AR_460]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=260174 CSC46_RS19775 WP_003084587.1 4195268..4195633(-) (pilH) [Pseudomonas aeruginosa strain AR_460]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |