Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CXR48_RS05550 Genome accession   NZ_CP025341
Coordinates   1096976..1097167 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain CMT-6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1091976..1102167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXR48_RS05515 argF 1092828..1093799 (+) 972 WP_015417202.1 ornithine carbamoyltransferase -
  CXR48_RS05520 - 1093875..1094054 (+) 180 WP_003155070.1 YjzC family protein -
  CXR48_RS05525 - 1094091..1094276 (-) 186 WP_003155069.1 YjzD family protein -
  CXR48_RS05535 - 1094537..1095271 (+) 735 WP_015417203.1 hypothetical protein -
  CXR48_RS05540 - 1095354..1095920 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  CXR48_RS05545 med 1096010..1096963 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  CXR48_RS05550 comZ 1096976..1097167 (+) 192 WP_003155061.1 ComZ family protein Regulator
  CXR48_RS05555 - 1097196..1097414 (-) 219 WP_007409123.1 hypothetical protein -
  CXR48_RS05560 - 1097582..1098520 (+) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  CXR48_RS05565 fabF 1098543..1099781 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  CXR48_RS05570 - 1099865..1100650 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  CXR48_RS05575 - 1100824..1101810 (+) 987 WP_003155054.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=260153 CXR48_RS05550 WP_003155061.1 1096976..1097167(+) (comZ) [Bacillus velezensis strain CMT-6]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=260153 CXR48_RS05550 WP_003155061.1 1096976..1097167(+) (comZ) [Bacillus velezensis strain CMT-6]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment