Detailed information NTG0259965

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: CXP43_RS07250
• Genome accession: NZ_CP025308
• Coordinates: 1383622..1383906 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain Lzh-a42
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1378622..1388906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXP43_RS07225 (CXP43_07225)	-	1379866..1380774 (+)	909	WP_014417631.1	ketopantoate reductase family protein	-
CXP43_RS07230 (CXP43_07230)	-	1380805..1382037 (-)	1233	WP_007409644.1	aminopeptidase	-
CXP43_RS07235 (CXP43_07235)	-	1382138..1382272 (-)	135	WP_003154559.1	protein YkpC	-
CXP43_RS07240 (CXP43_07240)	mreBH	1382344..1383351 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
CXP43_RS07250 (CXP43_07250)	abrB	1383622..1383906 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
CXP43_RS07255 (CXP43_07255)	-	1384079..1385383 (+)	1305	WP_014417634.1	ATP-binding protein	-
CXP43_RS07260 (CXP43_07260)	-	1385385..1386212 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase	-
CXP43_RS07265 (CXP43_07265)	ktrC	1386253..1386918 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
CXP43_RS07270 (CXP43_07270)	ade	1387067..1388800 (+)	1734	WP_014417636.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=259965 CXP43_RS07250 WP_014417633.1 1383622..1383906(+) (abrB) [Bacillus velezensis strain Lzh-a42]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=259965 CXP43_RS07250 WP_014417633.1 1383622..1383906(+) (abrB) [Bacillus velezensis strain Lzh-a42]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543