Detailed information NTG0259828

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CXQ83_RS05695
• Genome accession: NZ_CP025281
• Coordinates: 1088464..1089408 (+)
• Length: 314 a.a.
• NCBI ID: WP_002796919.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH503
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1083464..1094408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXQ83_RS05660 (CXQ83_05630)	-	1083476..1084675 (-)	1200	WP_057980448.1	glycosyltransferase family 8 protein	-
CXQ83_RS05665 (CXQ83_05635)	-	1084803..1086107 (+)	1305	WP_057991290.1	hypothetical protein	-
CXQ83_RS05670 (CXQ83_09630)	-	1086104..1086394 (+)	291	WP_232790902.1	hypothetical protein	-
CXQ83_RS05675 (CXQ83_09635)	-	1086340..1086480 (+)	141	WP_232790900.1	hypothetical protein	-
CXQ83_RS05680 (CXQ83_09640)	-	1086637..1087152 (+)	516	WP_223208924.1	hypothetical protein	-
CXQ83_RS05685 (CXQ83_05645)	-	1087155..1087571 (+)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
CXQ83_RS05690 (CXQ83_05650)	-	1087590..1088405 (-)	816	WP_057991291.1	glycosyltransferase family 2 protein	-
CXQ83_RS05695 (CXQ83_05655)	waaF	1088464..1089408 (+)	945	WP_002796919.1	lipopolysaccharide heptosyltransferase II	Regulator
CXQ83_RS05700 (CXQ83_05660)	-	1089391..1090845 (-)	1455	WP_002791237.1	hypothetical protein	-
CXQ83_RS05705 (CXQ83_05665)	gmhA	1090857..1091417 (-)	561	WP_002796916.1	D-sedoheptulose 7-phosphate isomerase	-
CXQ83_RS05710 (CXQ83_05670)	rfaE1	1091414..1092799 (-)	1386	WP_002796914.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CXQ83_RS05715 (CXQ83_05675)	rfaD	1092792..1093745 (-)	954	WP_101348773.1	ADP-glyceromanno-heptose 6-epimerase	-
CXQ83_RS05720 (CXQ83_05680)	-	1093742..1094305 (-)	564	WP_002777235.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36158.61 Da
• Isoelectric Point: 10.1355

>NTDB_id=259828 CXQ83_RS05695 WP_002796919.1 1088464..1089408(+) (waaF) [Campylobacter coli strain YH503]
MKIFIHLPTWLGDAVMASSALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHIAAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=259828 CXQ83_RS05695 WP_002796919.1 1088464..1089408(+) (waaF) [Campylobacter coli strain YH503]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTTATGGCTTCATCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCATATAGCTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.605	99.045	0.917