Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CSC60_RS13245 Genome accession   NZ_CP030323
Coordinates   2593760..2594434 (-) Length   224 a.a.
NCBI ID   WP_001166497.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR_475     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2588760..2599434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC60_RS13230 (CSC60_2442) vraG 2589943..2591832 (-) 1890 WP_000143626.1 ABC transporter permease VraG -
  CSC60_RS13235 (CSC60_2443) vraF 2591822..2592583 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CSC60_RS13240 (CSC60_2444) graS 2592727..2593767 (-) 1041 WP_001061260.1 histidine kinase GraS/ApsS -
  CSC60_RS13245 (CSC60_2445) braR 2593760..2594434 (-) 675 WP_001166497.1 response regulator transcription factor GraR/ApsR Regulator
  CSC60_RS13250 (CSC60_2446) graX 2594450..2595373 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  CSC60_RS13255 (CSC60_2447) - 2595486..2595992 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CSC60_RS13260 (CSC60_2448) - 2596201..2596629 (-) 429 WP_000198505.1 hypothetical protein -
  CSC60_RS13270 (CSC60_2449) - 2596958..2598001 (-) 1044 WP_001030774.1 alpha/beta hydrolase -
  CSC60_RS13275 (CSC60_2450) - 2598152..2599219 (-) 1068 WP_000980139.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26106.97 Da        Isoelectric Point: 4.3968

>NTDB_id=259749 CSC60_RS13245 WP_001166497.1 2593760..2594434(-) (braR) [Staphylococcus aureus strain AR_475]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=259749 CSC60_RS13245 WP_001166497.1 2593760..2594434(-) (braR) [Staphylococcus aureus strain AR_475]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402

Multiple sequence alignment