Detailed information NTG0025967

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPAG1_RS07025
• Genome accession: NC_008086
• Coordinates: 1437278..1438717 (+)
• Length: 479 a.a.
• NCBI ID: WP_000748990.1
• Uniprot ID: -
• Organism: Helicobacter pylori HPAG1
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1432278..1443717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPAG1_RS07005 (HPAG1_1384)	glmS	1432919..1434712 (-)	1794	WP_000334374.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPAG1_RS07010 (HPAG1_1385)	-	1434713..1434952 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPAG1_RS07015 (HPAG1_1386)	-	1434995..1435537 (-)	543	WP_000922968.1	hypothetical protein	-
HPAG1_RS07020 (HPAG1_1387)	dnaA	1435690..1437057 (+)	1368	WP_000380556.1	chromosomal replication initiator protein DnaA	-
HPAG1_RS07025 (HPAG1_1388)	comH	1437278..1438717 (+)	1440	WP_000748990.1	hypothetical protein	Machinery gene
HPAG1_RS07035 (HPAG1_1389)	-	1438897..1439649 (+)	753	WP_000767575.1	exodeoxyribonuclease III	-
HPAG1_RS07040 (HPAG1_1390)	-	1439646..1440281 (-)	636	WP_000668058.1	outer membrane protein	-
HPAG1_RS07045 (HPAG1_1391)	-	1440285..1440632 (-)	348	WP_000837036.1	hypothetical protein	-
HPAG1_RS07050 (HPAG1_1392)	recG	1440714..1442585 (+)	1872	WP_001158405.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54827.80 Da
• Isoelectric Point: 6.7221

>NTDB_id=25967 HPAG1_RS07025 WP_000748990.1 1437278..1438717(+) (comH) [Helicobacter pylori HPAG1]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPSRPAIPRNTQIVFSSKELKELHPHQMPSLNAPMQKPQNKPHSSQQPPQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNADISENNESNENKDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=25967 HPAG1_RS07025 WP_000748990.1 1437278..1438717(+) (comH) [Helicobacter pylori HPAG1]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAGCCGCCCTGCTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTGCATCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
GTGAAAATAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATCCCAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAGCA
GACTGCGACAGACATTACCCCTTGCGATTACAGCCACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTACACTAAAA
TTTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.495	100	0.975