Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | CSC60_RS02085 | Genome accession | NZ_CP030323 |
| Coordinates | 431086..431499 (-) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus strain AR_475 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 426086..436499
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC60_RS02045 (CSC60_0379) | - | 426177..426662 (-) | 486 | Protein_388 | LysR family transcriptional regulator | - |
| CSC60_RS02050 (CSC60_0380) | - | 426775..427326 (+) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| CSC60_RS02055 (CSC60_0381) | - | 427319..428539 (+) | 1221 | WP_000130756.1 | MFS transporter | - |
| CSC60_RS02060 (CSC60_0382) | - | 428601..428897 (-) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| CSC60_RS02065 | - | 428946..429149 (-) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| CSC60_RS02070 (CSC60_0383) | - | 429457..430443 (+) | 987 | WP_000662031.1 | tRNA-dihydrouridine synthase | - |
| CSC60_RS02075 (CSC60_0384) | - | 430551..431024 (-) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| CSC60_RS02085 (CSC60_0385) | lrpC | 431086..431499 (-) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| CSC60_RS02090 (CSC60_0386) | - | 431600..432007 (+) | 408 | WP_000173401.1 | hypothetical protein | - |
| CSC60_RS02095 (CSC60_0387) | - | 432346..432957 (-) | 612 | WP_000856594.1 | hypothetical protein | - |
| CSC60_RS14410 | - | 433220..433357 (-) | 138 | WP_021758025.1 | hypothetical protein | - |
| CSC60_RS14525 (CSC60_0388) | - | 433518..434279 (-) | 762 | WP_014363368.1 | ATP-binding protein | - |
| CSC60_RS14530 (CSC60_0389) | - | 434276..435205 (-) | 930 | WP_014363367.1 | DUF87 domain-containing protein | - |
| CSC60_RS02105 (CSC60_0390) | - | 435211..436497 (-) | 1287 | WP_000513494.1 | SIR2 family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=259667 CSC60_RS02085 WP_000998780.1 431086..431499(-) (lrpC) [Staphylococcus aureus strain AR_475]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=259667 CSC60_RS02085 WP_000998780.1 431086..431499(-) (lrpC) [Staphylococcus aureus strain AR_475]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |