Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CV094_RS08325 | Genome accession | NZ_CP025266 |
| Coordinates | 1738331..1738891 (-) | Length | 186 a.a. |
| NCBI ID | WP_085916952.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii isolate SMC_Paed_Ab_BL01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1733331..1743891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV094_RS08315 (CV094_08315) | pilX | 1736514..1737332 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CV094_RS08320 (CV094_08320) | pilW | 1737329..1738330 (-) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| CV094_RS08325 (CV094_08325) | pilV | 1738331..1738891 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| CV094_RS08330 (CV094_08330) | fimU | 1738885..1739358 (-) | 474 | WP_001214061.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CV094_RS08335 (CV094_08335) | ispH | 1739528..1740478 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CV094_RS08340 (CV094_08340) | gmk | 1740601..1741230 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| CV094_RS08345 (CV094_08345) | rpoZ | 1741303..1741581 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| CV094_RS08350 (CV094_08350) | - | 1741620..1741749 (+) | 130 | Protein_1618 | hypothetical protein | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20190.13 Da Isoelectric Point: 8.2254
>NTDB_id=259661 CV094_RS08325 WP_085916952.1 1738331..1738891(-) (pilV) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=259661 CV094_RS08325 WP_085916952.1 1738331..1738891(-) (pilV) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
99.462 |
100 |
0.995 |
| pilV | Acinetobacter baylyi ADP1 |
40.86 |
100 |
0.409 |