Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CXL14_RS17490 Genome accession   NZ_CP025258
Coordinates   3551370..3551561 (-) Length   63 a.a.
NCBI ID   WP_014417408.1    Uniprot ID   I2C3H7
Organism   Bacillus sp. SJ-10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546370..3556561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXL14_RS17465 - 3546729..3547715 (-) 987 WP_014417411.1 ABC transporter ATP-binding protein -
  CXL14_RS17470 - 3547889..3548674 (-) 786 WP_014417410.1 DUF2268 domain-containing protein -
  CXL14_RS17475 fabF 3548757..3549995 (-) 1239 WP_014417409.1 beta-ketoacyl-ACP synthase II -
  CXL14_RS17480 - 3550018..3550956 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CXL14_RS17485 - 3551123..3551341 (+) 219 WP_007409123.1 hypothetical protein -
  CXL14_RS17490 comZ 3551370..3551561 (-) 192 WP_014417408.1 ComZ family protein Regulator
  CXL14_RS17495 med 3551574..3552527 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  CXL14_RS17500 - 3552618..3553184 (-) 567 WP_032863798.1 hypothetical protein -
  CXL14_RS17505 - 3553267..3554001 (-) 735 WP_014417405.1 hypothetical protein -
  CXL14_RS17515 - 3554262..3554447 (+) 186 WP_007409129.1 YjzD family protein -
  CXL14_RS17520 - 3554484..3554663 (-) 180 WP_003155070.1 YjzC family protein -
  CXL14_RS17525 argF 3554739..3555710 (-) 972 WP_014417404.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=259582 CXL14_RS17490 WP_014417408.1 3551370..3551561(-) (comZ) [Bacillus sp. SJ-10]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEIIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=259582 CXL14_RS17490 WP_014417408.1 3551370..3551561(-) (comZ) [Bacillus sp. SJ-10]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATAATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment