Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CXL14_RS16230 Genome accession   NZ_CP025258
Coordinates   3318787..3319254 (+) Length   155 a.a.
NCBI ID   WP_101287872.1    Uniprot ID   -
Organism   Bacillus sp. SJ-10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3313787..3324254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXL14_RS16205 - 3314294..3314842 (-) 549 WP_014417610.1 hypothetical protein -
  CXL14_RS16210 fadH 3314956..3315720 (-) 765 WP_014417609.1 2,4-dienoyl-CoA reductase -
  CXL14_RS16215 - 3315864..3316727 (+) 864 WP_053285009.1 metallophosphoesterase -
  CXL14_RS16220 - 3316802..3317296 (+) 495 WP_088056573.1 L,D-transpeptidase family protein -
  CXL14_RS16225 - 3317372..3318664 (+) 1293 WP_014417606.1 MFS transporter -
  CXL14_RS16230 kre 3318787..3319254 (+) 468 WP_101287872.1 YkyB family protein Regulator
  CXL14_RS16235 cheV 3319296..3320207 (-) 912 WP_014417604.1 chemotaxis protein CheV -
  CXL14_RS20225 - 3320396..3320557 (+) 162 WP_007409608.1 hypothetical protein -
  CXL14_RS16245 - 3320758..3321927 (+) 1170 WP_007611083.1 aminotransferase A -
  CXL14_RS16250 - 3321952..3323772 (-) 1821 WP_021493759.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17949.74 Da        Isoelectric Point: 10.5497

>NTDB_id=259575 CXL14_RS16230 WP_101287872.1 3318787..3319254(+) (kre) [Bacillus sp. SJ-10]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 468 bp        

>NTDB_id=259575 CXL14_RS16230 WP_101287872.1 3318787..3319254(+) (kre) [Bacillus sp. SJ-10]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCG
CAATCCTAAAGCACAAATGTCTTTAACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTG
CCGCCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.258

100

0.923

Multiple sequence alignment