Detailed information NTG0259532

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: CXL14_RS05290
• Genome accession: NZ_CP025258
• Coordinates: 1031832..1032977 (-)
• Length: 381 a.a.
• NCBI ID: WP_014419129.1
• Uniprot ID: -
• Organism: Bacillus sp. SJ-10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1026832..1037977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXL14_RS05240	speE	1027128..1027958 (+)	831	WP_003151052.1	spermidine synthase	-
CXL14_RS05245	speB	1028017..1028889 (+)	873	WP_007614448.1	agmatinase	-
CXL14_RS05250	-	1029058..1029276 (+)	219	WP_003151056.1	LuxR C-terminal-related transcriptional regulator	-
CXL14_RS05260	-	1029867..1030379 (-)	513	WP_014419132.1	stage II sporulation protein M	-
CXL14_RS05265	-	1030423..1030704 (-)	282	WP_014419131.1	hypothetical protein	-
CXL14_RS05270	-	1030891..1031076 (-)	186	WP_014419130.1	DUF4177 domain-containing protein	-
CXL14_RS05275	-	1031111..1031314 (-)	204	WP_007407641.1	hypothetical protein	-
CXL14_RS05280	-	1031328..1031531 (-)	204	WP_003151064.1	helix-turn-helix transcriptional regulator	-
CXL14_RS05285	-	1031729..1031848 (-)	120	WP_021494790.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
CXL14_RS05290	rapF	1031832..1032977 (-)	1146	WP_014419129.1	tetratricopeptide repeat protein	Regulator
CXL14_RS05295	-	1033269..1033697 (+)	429	WP_014419128.1	DUF1934 family protein	-
CXL14_RS05300	argS	1033694..1035364 (+)	1671	WP_014419127.1	arginine--tRNA ligase	-
CXL14_RS05305	narK	1035499..1036689 (+)	1191	WP_007407632.1	nitrate transporter NarK	-
CXL14_RS05310	-	1036787..1037503 (+)	717	WP_014419126.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45581.65 Da
• Isoelectric Point: 4.5797

>NTDB_id=259532 CXL14_RS05290 WP_014419129.1 1031832..1032977(-) (rapF) [Bacillus sp. SJ-10]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSELLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAEYKLDFVKDCIEKAEFYFKMSESYYYMKQTYFS
MDYARQAYKIYHKQEAYNIRVLQCHSLFATNFLDLKQYDEAIQHFKKAYAMAEAEQQPQLMGRTLYNIGLCFNSQENYKP
AIDYIKRAIAVFEDGNIITSLPQAYFLITQIHYKIGNTAIARQYHDKGVSYAEEAEDSLYIVEYEFLESLYVGEPDEEAI
MECFDFLRDKLMYADLEDFALDVAKYYHERENFEKASAYFLKVEETRQQIQGGVKLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=259532 CXL14_RS05290 WP_014419129.1 1031832..1032977(-) (rapF) [Bacillus sp. SJ-10]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCAAGA
CTATCGGAGCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAATATAAGCTTGATTTTG
TCAAAGATTGTATCGAGAAAGCTGAATTTTATTTTAAGATGTCAGAGTCCTACTATTATATGAAACAGACTTATTTTTCT
ATGGATTATGCCCGGCAGGCTTATAAAATTTATCATAAGCAGGAGGCATATAATATAAGGGTGCTTCAGTGCCATTCATT
GTTCGCTACCAACTTTCTTGACTTAAAGCAATATGATGAAGCAATTCAGCATTTTAAAAAAGCTTATGCCATGGCAGAGG
CAGAACAGCAGCCTCAATTAATGGGCCGGACTCTATATAATATCGGACTTTGTTTTAACAGCCAAGAAAATTACAAACCA
GCCATTGACTACATAAAACGGGCAATAGCTGTTTTTGAAGATGGGAACATCATCACTTCTCTCCCGCAAGCCTATTTCTT
AATCACACAAATACATTATAAAATCGGAAATACGGCCATAGCCAGACAATATCATGACAAAGGGGTATCTTATGCAGAGG
AGGCAGAAGATTCCCTATATATAGTCGAGTATGAATTTTTAGAATCTTTATATGTCGGTGAGCCTGATGAAGAAGCAATC
ATGGAATGTTTTGACTTTCTCAGAGATAAATTGATGTATGCTGATCTTGAAGATTTTGCCTTAGATGTGGCAAAATATTA
TCATGAAAGAGAAAATTTCGAGAAGGCTTCCGCATATTTTTTAAAGGTGGAAGAAACAAGACAGCAGATTCAAGGAGGTG
TGAAGTTGTATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (189-253)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	78.215	100	0.782
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57