Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STER_RS05445 Genome accession   NC_008532
Coordinates   1015527..1016009 (-) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus LMD-9     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1010527..1021009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STER_RS05425 (STER_1094) pepT 1011009..1012232 (-) 1224 WP_011681190.1 peptidase T -
  STER_RS05430 (STER_1096) lepB 1012440..1012997 (-) 558 WP_011681191.1 signal peptidase I -
  STER_RS05435 (STER_1097) - 1013120..1014349 (-) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  STER_RS05440 (STER_1098) - 1014339..1015516 (-) 1178 Protein_1001 AI-2E family transporter -
  STER_RS05445 (STER_1099) mutX 1015527..1016009 (-) 483 WP_011681193.1 NUDIX hydrolase Machinery gene
  STER_RS05450 (STER_1100) ftsX 1016165..1017094 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STER_RS05455 (STER_1101) ftsE 1017087..1017779 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STER_RS05465 (STER_1104) queG 1019018..1020136 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=25937 STER_RS05445 WP_011681193.1 1015527..1016009(-) (mutX) [Streptococcus thermophilus LMD-9]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=25937 STER_RS05445 WP_011681193.1 1015527..1016009(-) (mutX) [Streptococcus thermophilus LMD-9]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment