Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   CXG95_RS07280 Genome accession   NZ_CP025226
Coordinates   1388564..1389364 (+) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain PB3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383564..1394364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS07260 (CXG95_07265) - 1383586..1384431 (+) 846 WP_003183371.1 TlyA family RNA methyltransferase -
  CXG95_RS07265 (CXG95_07270) argR 1384597..1385046 (+) 450 WP_003183369.1 transcriptional regulator ArgR -
  CXG95_RS07270 (CXG95_07275) recN 1385078..1386808 (+) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  CXG95_RS07275 (CXG95_07280) spoIVB 1386958..1388274 (+) 1317 WP_044051837.1 SpoIVB peptidase -
  CXG95_RS07280 (CXG95_07285) spo0A 1388564..1389364 (+) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  CXG95_RS07285 (CXG95_07290) - 1389737..1390033 (+) 297 WP_003183359.1 antimicrobial peptide LCI -
  CXG95_RS07290 (CXG95_07295) - 1390164..1390547 (+) 384 WP_003183357.1 serine acetyltransferase -
  CXG95_RS07295 (CXG95_07300) - 1390878..1392308 (+) 1431 WP_016886315.1 IS1182 family transposase -
  CXG95_RS07300 (CXG95_07305) - 1392582..1392902 (+) 321 WP_003183355.1 hypothetical protein -
  CXG95_RS07305 (CXG95_07310) - 1392983..1393558 (+) 576 WP_202604333.1 N-acetylmuramoyl-L-alanine amidase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=259185 CXG95_RS07280 WP_003183361.1 1388564..1389364(+) (spo0A) [Bacillus licheniformis strain PB3]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=259185 CXG95_RS07280 WP_003183361.1 1388564..1389364(+) (spo0A) [Bacillus licheniformis strain PB3]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment