Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   CXG95_RS03430 Genome accession   NZ_CP025226
Coordinates   668805..668945 (+) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus licheniformis strain PB3     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 663805..673945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS03400 (CXG95_03400) - 663906..664307 (+) 402 WP_003184870.1 YueI family protein -
  CXG95_RS03405 (CXG95_03405) - 664492..665043 (+) 552 WP_003184868.1 isochorismatase family cysteine hydrolase -
  CXG95_RS03410 (CXG95_03410) - 665121..666530 (+) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  CXG95_RS03415 (CXG95_03415) - 666709..667929 (+) 1221 WP_003184864.1 HDOD domain-containing protein -
  CXG95_RS03420 (CXG95_03420) - 667972..668310 (-) 339 WP_003184862.1 hypothetical protein -
  CXG95_RS03430 (CXG95_03430) degQ 668805..668945 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CXG95_RS03435 (CXG95_03435) - 669134..670003 (+) 870 WP_011198252.1 polyprenyl synthetase family protein -
  CXG95_RS03440 (CXG95_03440) comX 670018..670182 (+) 165 WP_011198251.1 competence pheromone ComX -
  CXG95_RS03445 (CXG95_03445) - 670222..671421 (+) 1200 WP_227601289.1 PDZ domain-containing protein -
  CXG95_RS03450 (CXG95_03450) - 671443..672605 (+) 1163 WP_085959889.1 IS3 family transposase -
  CXG95_RS03455 (CXG95_03455) - 672648..673832 (+) 1185 Protein_682 sensor histidine kinase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=259167 CXG95_RS03430 WP_003184860.1 668805..668945(+) (degQ) [Bacillus licheniformis strain PB3]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=259167 CXG95_RS03430 WP_003184860.1 668805..668945(+) (degQ) [Bacillus licheniformis strain PB3]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652

Multiple sequence alignment