Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   CXG95_RS01325 Genome accession   NZ_CP025226
Coordinates   272465..273199 (+) Length   244 a.a.
NCBI ID   WP_011198352.1    Uniprot ID   A0A415J866
Organism   Bacillus licheniformis strain PB3     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 267465..278199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXG95_RS01300 (CXG95_01295) degS 267764..268921 (+) 1158 WP_003185733.1 histidine kinase Regulator
  CXG95_RS01305 (CXG95_01300) degU 269003..269692 (+) 690 WP_003185730.1 two-component system response regulator DegU Regulator
  CXG95_RS01310 (CXG95_01305) - 269812..270654 (+) 843 WP_003185726.1 DegV family protein -
  CXG95_RS01315 (CXG95_01310) comFA 270775..272169 (+) 1395 WP_003185720.1 DEAD/DEAH box helicase Machinery gene
  CXG95_RS01320 (CXG95_01315) - 272224..272508 (+) 285 WP_003185718.1 competence protein ComFB -
  CXG95_RS01325 (CXG95_01320) comFC 272465..273199 (+) 735 WP_011198352.1 amidophosphoribosyltransferase Machinery gene
  CXG95_RS01330 (CXG95_01325) - 273258..273677 (+) 420 WP_003185715.1 TIGR03826 family flagellar region protein -
  CXG95_RS01335 (CXG95_01330) flgM 273757..274023 (+) 267 WP_003185713.1 flagellar biosynthesis anti-sigma factor FlgM -
  CXG95_RS01340 (CXG95_01335) - 274042..274518 (+) 477 WP_003185711.1 flagellar protein FlgN -
  CXG95_RS01345 (CXG95_01340) flgK 274534..276057 (+) 1524 WP_003185709.1 flagellar hook-associated protein FlgK -
  CXG95_RS01350 (CXG95_01345) flgL 276068..276979 (+) 912 WP_003185705.1 flagellar hook-associated protein FlgL -
  CXG95_RS01355 (CXG95_01350) - 277029..277595 (+) 567 WP_003185702.1 DUF6470 family protein -
  CXG95_RS01360 (CXG95_01355) fliW 277617..278048 (+) 432 WP_011198351.1 flagellar assembly protein FliW -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27811.22 Da        Isoelectric Point: 9.4827

>NTDB_id=259162 CXG95_RS01325 WP_011198352.1 272465..273199(+) (comFC) [Bacillus licheniformis strain PB3]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide


Download         Length: 735 bp        

>NTDB_id=259162 CXG95_RS01325 WP_011198352.1 272465..273199(+) (comFC) [Bacillus licheniformis strain PB3]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(151-242)

Double zinc ribbon domain (DZR_2)

(17-76)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A415J866

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

52.321

97.131

0.508

Multiple sequence alignment