Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   CXM95_RS10815 Genome accession   NZ_CP025223
Coordinates   2238580..2240253 (-) Length   557 a.a.
NCBI ID   WP_008378481.1    Uniprot ID   -
Organism   Enterococcus sp. CR-Ec1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2233580..2245253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXM95_RS10790 (CXM95_10790) pstB 2233776..2234582 (-) 807 WP_005225783.1 phosphate ABC transporter ATP-binding protein PstB -
  CXM95_RS10795 (CXM95_10795) pstA 2234596..2235480 (-) 885 WP_008378478.1 phosphate ABC transporter permease PstA -
  CXM95_RS10800 (CXM95_10800) pstC 2235480..2236400 (-) 921 WP_005235375.1 phosphate ABC transporter permease subunit PstC -
  CXM95_RS10805 (CXM95_10805) - 2236498..2237352 (-) 855 WP_008378479.1 phosphate ABC transporter substrate-binding protein PstS -
  CXM95_RS10810 (CXM95_10810) - 2237752..2238483 (-) 732 WP_008378480.1 alpha/beta hydrolase -
  CXM95_RS10815 (CXM95_10815) recN 2238580..2240253 (-) 1674 WP_008378481.1 DNA repair protein RecN Machinery gene
  CXM95_RS10820 (CXM95_10820) argR 2240269..2240718 (-) 450 WP_005235362.1 arginine repressor -
  CXM95_RS10825 (CXM95_10825) - 2240816..2241637 (-) 822 WP_008378483.1 TlyA family RNA methyltransferase -
  CXM95_RS10830 (CXM95_10830) - 2241634..2242530 (-) 897 WP_005235358.1 farnesyl diphosphate synthase -
  CXM95_RS10835 (CXM95_10835) - 2242527..2242748 (-) 222 WP_005235356.1 exodeoxyribonuclease VII small subunit -
  CXM95_RS10840 (CXM95_10840) xseA 2242729..2244081 (-) 1353 WP_101699156.1 exodeoxyribonuclease VII large subunit -
  CXM95_RS10845 (CXM95_10845) - 2244082..2244933 (-) 852 WP_005235351.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62586.76 Da        Isoelectric Point: 4.5566

>NTDB_id=259119 CXM95_RS10815 WP_008378481.1 2238580..2240253(-) (recN) [Enterococcus sp. CR-Ec1]
MLLELSIQNFAIISNLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGGRGSSDYLRQGAEKCRLEGIFEWPNQQEFKDLT
ADLGIDEEEVLIVQRDISQSGKNICRVNGRTVTLSVLRQIGLFLVDIQGQNEHQELLQPEKHLTLMDGFGDDSFKAELAD
YRQAYQSYRSLEKHVRTIQENEQLYVQRMDMLRFQQEEIAQAELMGNEEELLIDEREKLTNYQKIVDALGQSYGALSAEE
VNSLDGVSVALSEIQSIAHLDPAYEKISEAIQSAYYLLQDAATDISRQVDNLELDEGRLEEVISRLETIRQLKRKYGESI
PVILAYYDEISKEISESAYTEGQLEQLEEELAQKAEAVWQLAEALHVKRRELAHRLEKEIVQELKELYMEHAQFEVRFAP
GSKQLSSSGFDTVEFYLTTNPGEGMKPLVRVASGGELSRILLALKSIFSRKQGITSIVFDEVDTGVSGRVAQAIAEKIAK
IAANSQVLCITHLPQVAAVADNQYFIEKAIQEGRTETHVRKLSKEERVAEIARMLSGAEITDLTIEHARELLALAHR

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=259119 CXM95_RS10815 WP_008378481.1 2238580..2240253(-) (recN) [Enterococcus sp. CR-Ec1]
ATGCTTTTAGAATTGTCGATCCAAAATTTTGCGATTATTTCCAACTTGCACTTATCTTTCCATGAGGGAATGACGGCACT
GACAGGTGAGACAGGTGCCGGGAAATCAATTATTATCGATGCGATGGGTTTGCTAGCAGGCGGTAGAGGTTCCAGCGACT
ATTTGCGTCAAGGAGCAGAGAAATGCCGTTTAGAAGGGATCTTCGAATGGCCGAATCAGCAGGAGTTCAAAGACTTGACC
GCAGATTTAGGTATTGATGAAGAAGAAGTTTTGATCGTACAACGAGATATCTCTCAATCGGGGAAAAATATTTGTCGTGT
CAATGGTCGAACCGTTACCTTGTCGGTTTTGCGTCAAATCGGTTTATTCTTGGTCGATATCCAAGGACAAAATGAGCATC
AAGAGCTGCTGCAGCCAGAAAAACATTTGACCTTGATGGATGGGTTTGGGGATGATAGCTTTAAAGCGGAGCTTGCGGAT
TACCGTCAAGCCTATCAAAGCTATCGCTCTTTAGAAAAACACGTCAGGACCATTCAAGAAAATGAACAGCTATATGTCCA
GCGAATGGACATGTTGCGTTTTCAACAAGAAGAAATCGCCCAAGCAGAATTGATGGGAAATGAAGAAGAACTGCTGATCG
ATGAACGAGAAAAACTGACCAATTATCAAAAAATCGTGGATGCTCTAGGGCAAAGCTATGGTGCCTTATCTGCCGAAGAA
GTCAATAGCCTAGATGGGGTCAGTGTAGCTTTATCCGAGATCCAGTCAATCGCCCATCTTGATCCGGCTTACGAAAAAAT
CAGTGAAGCGATCCAAAGTGCGTATTACTTGTTGCAAGATGCAGCCACTGATATTTCGCGGCAAGTCGACAATCTTGAAT
TAGATGAAGGCCGACTGGAAGAAGTCATTTCGCGGCTGGAAACGATTCGTCAATTGAAGCGCAAATACGGGGAGTCGATT
CCTGTGATTCTTGCTTACTATGATGAGATCAGTAAAGAAATCAGCGAGTCTGCCTATACAGAAGGTCAGTTGGAGCAATT
AGAAGAAGAGCTTGCCCAAAAAGCTGAAGCAGTTTGGCAGCTGGCGGAAGCCTTGCACGTCAAACGACGTGAACTGGCTC
ATCGTTTAGAAAAAGAAATCGTTCAAGAGTTAAAAGAGCTGTACATGGAGCACGCACAATTTGAAGTACGGTTTGCACCT
GGCTCAAAACAATTGAGTAGCAGCGGATTTGACACCGTAGAATTTTATTTGACCACAAATCCTGGTGAAGGCATGAAGCC
GTTGGTGCGGGTTGCTTCTGGGGGAGAACTTTCACGGATCTTACTGGCCCTCAAATCAATTTTCTCTCGGAAACAAGGAA
TCACCAGTATTGTTTTTGACGAAGTTGATACTGGGGTCAGTGGCCGAGTAGCCCAAGCAATTGCTGAAAAAATCGCCAAG
ATCGCAGCCAATTCGCAAGTTTTGTGTATCACTCACTTGCCGCAAGTAGCTGCTGTAGCGGATAATCAATATTTTATTGA
AAAAGCAATTCAAGAAGGACGGACAGAAACCCACGTCCGTAAACTATCTAAAGAAGAACGGGTGGCAGAGATCGCCCGTA
TGCTCTCAGGTGCAGAAATCACCGATTTAACGATCGAACATGCACGAGAACTATTGGCACTTGCACACCGATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

47.544

100

0.487

Multiple sequence alignment