Detailed information NTG0258951

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: DP112_RS05395
• Genome accession: NZ_CP030125
• Coordinates: 1071560..1074826 (-)
• Length: 1088 a.a.
• NCBI ID: WP_114866521.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HA1003
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1066560..1079826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DP112_RS05385 (DP112_05385)	plsY	1067252..1067896 (+)	645	WP_105202382.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
DP112_RS05390 (DP112_05390)	rexA	1067907..1071560 (-)	3654	WP_164503916.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
DP112_RS05395 (DP112_05395)	rexB	1071560..1074826 (-)	3267	WP_114866521.1	ATP-dependent nuclease subunit B	Machinery gene

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124546.84 Da
• Isoelectric Point: 5.1624

>NTDB_id=258951 DP112_RS05395 WP_114866521.1 1071560..1074826(-) (rexB) [Streptococcus suis strain HA1003]
MKLVYTDIRNPLTQYLTDIAAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDKKETGQP
LDDVGLAMIFFRVLSQFDAGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMESPDKQADLVKIFLAVTDILSK
EGFEHQSKLAQLTSLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALHERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSTQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSYHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFSVNGRADYDVETVKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMA
FLEAIELPKNMEKMSRTLSEVEQEKEEQVWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
SPQIYNEGEDSLSPYIKILQKMGLKTEERGRMKTLSPQDIGHYKSLLSRLIESERPSLEHEEWEGQTAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLAADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSDLDFDQKVDKAILHTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDRALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETRDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEEEFAVLLNHNQELYKQAAKDILDGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=258951 DP112_RS05395 WP_114866521.1 1071560..1074826(-) (rexB) [Streptococcus suis strain HA1003]
ATGAAATTAGTTTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATATCGCAGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTACATTGCTCCAAACTCTCTATCTTTTGAGATGGAGCGCAAGGTCTTGGAATATTTGCCTGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAACTCGCTCGCTATTTGATGATTGATAAGAAAGAAACAGGTCAACCG
CTGGATGATGTTGGTCTGGCTATGATTTTCTTTCGTGTTCTATCGCAATTTGATGCTGGCGACTTGAAAGTCTATGGTCG
TTTACAGACAGATTTTGGGTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGAGTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGCTGACTAGCTTGGTGGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTACATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGCCACCTATGCGGAAGGGAATGTTTATCAAGCCAAC
GTTGACTTTTTACGTCAGTTATCAACGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGACCAAGAAA
AAATCCAACTATGGGAAGTCGTCAACCAAAAAGAAGAGGTGGAGCAGGTTGCGACTGCGATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATTTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGATATTCCTTACTATTTTGGTAAGGCAGAGGAGATGAGTTATCATCCCCTGGTCCATTTTGTGGAGTCCTTGGAAC
GCTTGCGTCGCTATCGTTTCCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTTCGGTCAA
TGGCAGAGCGGACTACGATGTTGAGACTGTCAAGGAGAAGCGACTTGTCTATGATTTGAATGTCTTGGAACCCCTACGTG
CTAAGATTATGGAGCCTTTGAACCAGCTGTTTAAGGCTGGACCACAATCTGGAACTGCCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCAATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAACTTTGAGTGAGGTAGAACAAGAAAAAGAAGA
ACAGGTCTGGAAAAGTTTTACCCATATTCTAGAGAATTTTCATCAGATTTTCGGAAAAGAAAAATTGAAAATGGATGATT
TTCTGGCAATTTTACAGGCAGGCATGCAGGCCAGTCACTATCGTACCGTTCCAGCAACAGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCACACACTGCTAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTTTTGACAGAAGAAGAGATGGAAAAAGTCAATCTTGTCTCGGCTAGTTCTTCACGTTTTGATTTGG
TCAGTCGAGAGAATATCAAGAAGAACCATGCAGCCATGATGTCTCTGCTGAATGCTGCGACGGAACAGTTAGTTATTTCA
AGTCCTCAGATTTATAACGAAGGCGAGGATAGTCTCTCACCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAAACCGA
AGAACGTGGAAGGATGAAAACACTTAGTCCGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGATTGATTGAGTCAG
AAAGACCCTCTCTTGAACATGAAGAATGGGAAGGACAGACGGCCTTCTGGACAGTATTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGCGAAATAACTTCTAAACAACTTGCAGCTGATACCTTGGCTGC
TCTCTATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TCCGTAATGTTCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACTGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGATCTAGATTTTGATCAAAAAGTGGACAAGGCTATCCTGCATACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAGGATGCGGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGCTCCA
GCGCGACTATTTTGCGGGATAATGATTTGGTTGAAATTGATGGTCAGGAAAAGAGTTTCCGTCAGGATAGGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACAATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAGAGATAAACCAGTTTTTGGGGCTATGTACTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACGAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGAAGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCCAAGGATATCCTGGATGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGATCGGTGGCAGGTGAGCAGTTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
ACGGCGGTTGGTCAAAGAAGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1042)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.471	100	0.461