Detailed information NTG0258734

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: DPQ29_RS04185
• Genome accession: NZ_CP030111
• Coordinates: 815938..817143 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain MCJCHV-1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 810938..822143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPQ29_RS04165 (DPQ29_04165)	-	811000..812256 (+)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-
DPQ29_RS04170 (DPQ29_04170)	neuC	812253..813428 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
DPQ29_RS04175 (DPQ29_04175)	-	813421..814569 (+)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
DPQ29_RS04180 (DPQ29_04180)	-	814559..815788 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
DPQ29_RS04185 (DPQ29_04185)	kpsS	815938..817143 (-)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
DPQ29_RS04190 (DPQ29_04190)	-	817178..819205 (-)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
DPQ29_RS04195 (DPQ29_04195)	kdsB	819202..819942 (-)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DPQ29_RS04200 (DPQ29_04200)	-	819952..821628 (-)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=258734 DPQ29_RS04185 WP_001161835.1 815938..817143(-) (kpsS) [Escherichia coli strain MCJCHV-1]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=258734 DPQ29_RS04185 WP_001161835.1 815938..817143(-) (kpsS) [Escherichia coli strain MCJCHV-1]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387