Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   DOU34_RS18715 Genome accession   NZ_CP030097
Coordinates   3758248..3759075 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain SH-B74     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3753248..3764075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DOU34_RS18690 - 3754323..3755756 (+) 1434 WP_020955207.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  DOU34_RS18695 tmk 3755753..3756391 (+) 639 WP_007409918.1 dTMP kinase -
  DOU34_RS18700 darA 3756462..3756791 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  DOU34_RS18705 - 3756804..3757244 (+) 441 WP_004264730.1 DUF327 family protein -
  DOU34_RS18710 holB 3757256..3758245 (+) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  DOU34_RS18715 yaaT 3758248..3759075 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  DOU34_RS18720 yabA 3759090..3759449 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  DOU34_RS18725 - 3759510..3760253 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  DOU34_RS18730 - 3760240..3760539 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  DOU34_RS18735 rsmI 3760514..3761395 (+) 882 WP_020953847.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  DOU34_RS18740 abrB 3761445..3761735 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=258626 DOU34_RS18715 WP_004264723.1 3758248..3759075(+) (yaaT) [Bacillus amyloliquefaciens strain SH-B74]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=258626 DOU34_RS18715 WP_004264723.1 3758248..3759075(+) (yaaT) [Bacillus amyloliquefaciens strain SH-B74]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967