Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CW750_RS01065 | Genome accession | NZ_CP025136 |
| Coordinates | 214673..214978 (-) | Length | 101 a.a. |
| NCBI ID | WP_016265375.1 | Uniprot ID | A0A9N7J126 |
| Organism | Latilactobacillus sakei strain WiKim0072 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 209673..219978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CW750_RS01030 (CW750_01030) | - | 210112..210477 (+) | 366 | WP_011374991.1 | DUF805 domain-containing protein | - |
| CW750_RS01040 (CW750_01040) | - | 211020..211478 (-) | 459 | WP_035145008.1 | hypothetical protein | - |
| CW750_RS01045 (CW750_01045) | - | 211533..212729 (-) | 1197 | WP_011374993.1 | acetate kinase | - |
| CW750_RS01050 (CW750_01050) | - | 212751..213761 (-) | 1011 | WP_016265372.1 | class I SAM-dependent methyltransferase | - |
| CW750_RS01055 (CW750_01055) | - | 213885..214223 (-) | 339 | WP_035145011.1 | hypothetical protein | - |
| CW750_RS01060 (CW750_01060) | comGF | 214186..214698 (-) | 513 | WP_035145013.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CW750_RS01065 (CW750_01065) | comGE | 214673..214978 (-) | 306 | WP_016265375.1 | hypothetical protein | Machinery gene |
| CW750_RS01070 (CW750_01070) | comGD | 214965..215369 (-) | 405 | WP_235596237.1 | hypothetical protein | Machinery gene |
| CW750_RS01075 (CW750_01075) | comGC | 215389..215688 (-) | 300 | WP_025016383.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CW750_RS01080 (CW750_01080) | comGB | 215685..216692 (-) | 1008 | WP_061827023.1 | type II secretion system F family protein | Machinery gene |
| CW750_RS01085 (CW750_01085) | comGA | 216685..217575 (-) | 891 | WP_025016380.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CW750_RS01090 (CW750_01090) | - | 217692..218423 (-) | 732 | WP_011375002.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CW750_RS01095 (CW750_01095) | - | 218514..219014 (-) | 501 | WP_016265379.1 | VanZ family protein | - |
| CW750_RS01100 (CW750_01100) | - | 219111..219485 (+) | 375 | WP_011375004.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11439.42 Da Isoelectric Point: 11.1577
>NTDB_id=258557 CW750_RS01065 WP_016265375.1 214673..214978(-) (comGE) [Latilactobacillus sakei strain WiKim0072]
MFRSRPAFSLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKITTKAGESVAINWTTD
MFRSRPAFSLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKITTKAGESVAINWTTD
Nucleotide
Download Length: 306 bp
>NTDB_id=258557 CW750_RS01065 WP_016265375.1 214673..214978(-) (comGE) [Latilactobacillus sakei strain WiKim0072]
ATGTTCAGAAGTAGGCCGGCTTTTTCACTCGTTGAAAATATCATCGCCTTAACCTTGGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGATAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
ATGTTCAGAAGTAGGCCGGCTTTTTCACTCGTTGAAAATATCATCGCCTTAACCTTGGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGATAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Latilactobacillus sakei subsp. sakei 23K |
99.01 |
100 |
0.99 |