Detailed information NTG0258531

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: DOU34_RS05790
• Genome accession: NZ_CP030097
• Coordinates: 1092520..1094616 (-)
• Length: 698 a.a.
• NCBI ID: WP_015417343.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1087520..1099616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS05765	-	1088110..1088370 (+)	261	WP_003154690.1	aspartyl-phosphate phosphatase Spo0E family protein	-
DOU34_RS05770	-	1088580..1090097 (-)	1518	WP_061046826.1	ATP-binding protein	-
DOU34_RS05775	-	1090296..1090742 (+)	447	WP_007408463.1	MarR family transcriptional regulator	-
DOU34_RS05780	motB	1090778..1091563 (-)	786	WP_003154685.1	flagellar motor protein MotB	-
DOU34_RS05785	motA	1091535..1092350 (-)	816	WP_007408461.1	flagellar motor stator protein MotA	-
DOU34_RS05790	clpE	1092520..1094616 (-)	2097	WP_015417343.1	ATP-dependent protease ATP-binding subunit ClpE	Regulator
DOU34_RS05800	-	1095018..1096055 (+)	1038	WP_047935656.1	membrane protein	-
DOU34_RS05805	-	1096153..1097274 (+)	1122	WP_061046825.1	hypothetical protein	-
DOU34_RS05810	queC	1097525..1098184 (+)	660	WP_003154679.1	7-cyano-7-deazaguanine synthase QueC	-
DOU34_RS05815	queD	1098245..1098625 (+)	381	WP_228842255.1	6-carboxytetrahydropterin synthase QueD	-
DOU34_RS05820	queE	1098618..1099349 (+)	732	WP_061046824.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 77784.84 Da
• Isoelectric Point: 5.4325

>NTDB_id=258531 DOU34_RS05790 WP_015417343.1 1092520..1094616(-) (clpE) [Bacillus amyloliquefaciens strain SH-B74]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDHEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALHEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVLEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDE
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDNNEIKAFHVVMEEDGIKVRAQ

Nucleotide

• Length: 2097 bp

>NTDB_id=258531 DOU34_RS05790 WP_015417343.1 1092520..1094616(-) (clpE) [Bacillus amyloliquefaciens strain SH-B74]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACTAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATCATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTAGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAACGTCATCTTGTT
CATTGACGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAGCTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCATGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCGTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTCAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCCTGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTAACGGACGAA
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCAGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATAACAACGAAATAAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-679)

• AAA lid domain (AAA_lid_9) (252-351)

• AAA domain (Cdc48 subfamily) (AAA_2) (436-602)

• ATPase family associated with various cellular activities (AAA) (AAA) (115-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	56.871	100	0.599
clpC	Lactococcus lactis subsp. cremoris KW2	56.676	100	0.596
clpE	Streptococcus pneumoniae Rx1	56.267	100	0.592
clpE	Streptococcus pneumoniae R6	56.267	100	0.592
clpE	Streptococcus pneumoniae D39	56.267	100	0.592
clpE	Streptococcus pneumoniae TIGR4	56.267	100	0.592
clpC	Bacillus subtilis subsp. subtilis str. 168	54.232	91.404	0.496
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.311	91.261	0.423
clpC	Streptococcus thermophilus LMD-9	44.154	93.123	0.411
clpC	Streptococcus pneumoniae TIGR4	45.88	88.682	0.407
clpC	Streptococcus pneumoniae Rx1	45.88	88.682	0.407
clpC	Streptococcus pneumoniae D39	45.88	88.682	0.407
clpC	Streptococcus thermophilus LMG 18311	43.538	93.123	0.405
clpC	Streptococcus mutans UA159	44.3	87.966	0.39