Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CW734_RS03450 Genome accession   NZ_CP025135
Coordinates   428592..429542 (+) Length   316 a.a.
NCBI ID   WP_068460268.1    Uniprot ID   A0A2I0EUE6
Organism   Planococcus sp. MB-3u-03     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 423592..434542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CW734_RS03435 (CW734_03435) - 424249..424962 (+) 714 WP_101189446.1 VOC family protein -
  CW734_RS03440 (CW734_03440) hflX 425064..426335 (+) 1272 WP_101189447.1 GTPase HflX -
  CW734_RS03445 (CW734_03445) - 426515..427390 (+) 876 WP_101189448.1 DUF6612 family protein -
  CW734_RS03450 (CW734_03450) ceuB 428592..429542 (+) 951 WP_068460268.1 ABC transporter permease Machinery gene
  CW734_RS03455 (CW734_03455) - 429535..430485 (+) 951 WP_101189449.1 iron chelate uptake ABC transporter family permease subunit -
  CW734_RS03460 (CW734_03460) - 430482..431243 (+) 762 WP_101189450.1 ABC transporter ATP-binding protein -
  CW734_RS03465 (CW734_03465) - 431377..432018 (+) 642 WP_157824113.1 phosphatase PAP2 family protein -
  CW734_RS03470 (CW734_03470) - 432117..433400 (-) 1284 WP_101189452.1 ammonium transporter -
  CW734_RS03475 (CW734_03475) - 433413..433754 (-) 342 WP_101189453.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34956.32 Da        Isoelectric Point: 10.1518

>NTDB_id=258528 CW734_RS03450 WP_068460268.1 428592..429542(+) (ceuB) [Planococcus sp. MB-3u-03]
MKKRILIPILILLSFISLFVGVSSISPLDLLDFQSEETQIFLVSRFPRLVAILLAGAGMSMAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMIEKMAVAFFFALAGTFLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYRADVI
QNMSAWLQGDFSMVMKGSYELLYISVPVFIIAYMYANRFTVAGMGEDFSKNLGLKYRSVVNIGLTLVALITATVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTAMLGAIFLLVCDILGRVLIYPYEITISLMVGVIGSFIFLIMLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=258528 CW734_RS03450 WP_068460268.1 428592..429542(+) (ceuB) [Planococcus sp. MB-3u-03]
ATGAAAAAACGTATTCTAATACCCATATTGATCCTTCTGTCGTTCATCTCCCTGTTTGTCGGAGTCAGCAGCATCAGCCC
GCTGGACCTCCTTGATTTTCAATCGGAAGAAACACAGATTTTCCTCGTCAGCCGCTTTCCGCGGCTTGTCGCAATTTTAC
TTGCAGGGGCCGGCATGAGCATGGCGGGACTCATCATGCAGCAATTGAGCCGCAATAAATTCGTCTCGCCGACAACTGCC
GGGACGCTCGATGCGACGCGCCTCGGGATTCTCGTGTCGATGCTGTTGTTTGCGAACGCGTCGATGATCGAGAAGATGGC
GGTAGCATTTTTCTTCGCGCTCGCCGGCACTTTCTTGTTCATGCAAATTCTCAACCGCATCAAGTTCAAGGACGCCATCT
TCATTCCGCTCATCGGCTTGATGTTCGGCAATATCCTGTCGTCGATCACCACATTTTTTGCCTACCGGGCAGACGTTATC
CAGAACATGTCGGCTTGGCTGCAGGGCGATTTTTCGATGGTCATGAAAGGCAGCTATGAACTTCTTTACATAAGTGTACC
GGTCTTCATCATCGCCTATATGTACGCCAACCGCTTTACCGTCGCAGGTATGGGTGAGGATTTCTCGAAAAACTTAGGGC
TGAAATACCGCAGCGTCGTCAACATCGGCTTGACCCTGGTTGCGCTTATTACGGCGACTGTGGTTTTGACCGTCGGCATG
ATCCCGTTCCTCGGATTGATCATTCCGAATATCGTCTCCATCTTCAAAGGGGACCATCTGCAGAAAACCTTGCCGCATAC
TGCGATGCTCGGTGCCATCTTCCTATTGGTCTGTGACATTCTCGGGCGTGTCTTGATTTATCCGTACGAGATCACAATCA
GCCTGATGGTGGGCGTCATCGGAAGCTTTATCTTCCTGATCATGTTGTTTAGGAGGAAGGCGTATGCGTGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I0EUE6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.994

99.051

0.535

Multiple sequence alignment