Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CU648_RS24865 | Genome accession | NZ_CP025122 |
| Coordinates | 4598565..4598852 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648331.1 | Uniprot ID | A0A2A8KZX2 |
| Organism | Bacillus sp. HBCD-sjtu | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4593565..4603852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU648_RS24845 (CU648_24845) | - | 4594739..4594936 (+) | 198 | WP_101195685.1 | DUF4083 domain-containing protein | - |
| CU648_RS24850 (CU648_24850) | - | 4594968..4595429 (+) | 462 | WP_000035009.1 | NUDIX hydrolase | - |
| CU648_RS24855 (CU648_24855) | nadE | 4595478..4596296 (-) | 819 | WP_000174879.1 | ammonia-dependent NAD(+) synthetase | - |
| CU648_RS24860 (CU648_24860) | - | 4596568..4598448 (+) | 1881 | WP_101195686.1 | FtsX-like permease family protein | - |
| CU648_RS24865 (CU648_24865) | abrB | 4598565..4598852 (+) | 288 | WP_000648331.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CU648_RS24870 (CU648_24870) | - | 4599127..4600077 (+) | 951 | WP_101195687.1 | serine protease | - |
| CU648_RS24875 (CU648_24875) | - | 4600118..4600426 (-) | 309 | WP_001259894.1 | helix-turn-helix transcriptional regulator | - |
| CU648_RS24880 (CU648_24880) | - | 4600535..4601470 (+) | 936 | WP_101195688.1 | aldo/keto reductase | - |
| CU648_RS24885 (CU648_24885) | - | 4601519..4602694 (+) | 1176 | WP_101195689.1 | MFS transporter | - |
| CU648_RS24890 (CU648_24890) | - | 4602883..4603107 (-) | 225 | WP_000162601.1 | hypothetical protein | - |
| CU648_RS24895 (CU648_24895) | - | 4603193..4603540 (-) | 348 | WP_000426313.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10645.40 Da Isoelectric Point: 6.3179
>NTDB_id=258520 CU648_RS24865 WP_000648331.1 4598565..4598852(+) (abrB) [Bacillus sp. HBCD-sjtu]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=258520 CU648_RS24865 WP_000648331.1 4598565..4598852(+) (abrB) [Bacillus sp. HBCD-sjtu]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |