Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CU648_RS20760 Genome accession   NZ_CP025122
Coordinates   3838611..3838787 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus sp. HBCD-sjtu     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3833611..3843787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CU648_RS20740 (CU648_20740) clpB 3833947..3836547 (+) 2601 WP_000365416.1 ATP-dependent chaperone ClpB -
  CU648_RS20745 (CU648_20745) - 3836581..3836763 (-) 183 WP_001211116.1 YjzD family protein -
  CU648_RS20750 (CU648_20750) - 3836921..3837655 (+) 735 WP_000028701.1 hydrolase -
  CU648_RS20755 (CU648_20755) - 3837685..3838557 (+) 873 WP_157827816.1 NAD(P)-dependent oxidoreductase -
  CU648_RS20760 (CU648_20760) comZ 3838611..3838787 (+) 177 WP_009879752.1 ComZ family protein Regulator
  CU648_RS20770 (CU648_20770) fabH 3839188..3840120 (+) 933 WP_017559982.1 beta-ketoacyl-ACP synthase III -
  CU648_RS20775 (CU648_20775) fabF 3840152..3841390 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  CU648_RS20780 (CU648_20780) - 3841496..3842284 (+) 789 WP_000513293.1 DUF2268 domain-containing protein -
  CU648_RS20785 (CU648_20785) - 3842428..3843174 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=258512 CU648_RS20760 WP_009879752.1 3838611..3838787(+) (comZ) [Bacillus sp. HBCD-sjtu]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=258512 CU648_RS20760 WP_009879752.1 3838611..3838787(+) (comZ) [Bacillus sp. HBCD-sjtu]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment