Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CU648_RS14570 | Genome accession | NZ_CP025122 |
| Coordinates | 2675349..2675633 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus sp. HBCD-sjtu | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2670349..2680633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU648_RS14535 (CU648_14535) | tmk | 2670503..2671129 (+) | 627 | WP_000677237.1 | dTMP kinase | - |
| CU648_RS14540 (CU648_14540) | holB | 2671165..2672148 (+) | 984 | WP_000169577.1 | DNA polymerase III subunit delta' | - |
| CU648_RS14545 (CU648_14545) | - | 2672154..2672981 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| CU648_RS14550 (CU648_14550) | yabA | 2672996..2673346 (+) | 351 | WP_000412056.1 | DNA replication initiation control protein YabA | - |
| CU648_RS14555 (CU648_14555) | - | 2673467..2674207 (+) | 741 | WP_001055361.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CU648_RS14560 (CU648_14560) | - | 2674194..2674484 (+) | 291 | WP_000414342.1 | GIY-YIG nuclease family protein | - |
| CU648_RS14565 (CU648_14565) | rsmI | 2674453..2675328 (+) | 876 | WP_000267808.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CU648_RS14570 (CU648_14570) | abrB | 2675349..2675633 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CU648_RS14575 (CU648_14575) | metG | 2676124..2678106 (+) | 1983 | WP_000134147.1 | methionine--tRNA ligase | - |
| CU648_RS14580 (CU648_14580) | - | 2678272..2679039 (+) | 768 | WP_000895823.1 | TatD family hydrolase | - |
| CU648_RS14585 (CU648_14585) | rnmV | 2679254..2679811 (+) | 558 | WP_000692830.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=258502 CU648_RS14570 WP_000843036.1 2675349..2675633(-) (abrB) [Bacillus sp. HBCD-sjtu]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=258502 CU648_RS14570 WP_000843036.1 2675349..2675633(-) (abrB) [Bacillus sp. HBCD-sjtu]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |