Detailed information NTG0258266

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DK876_RS04510
• Genome accession: NZ_CP030022
• Coordinates: 923268..924338 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain ISU2714
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 918268..929338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK876_RS04485 (DK876_04665)	-	919383..920051 (+)	669	WP_011922395.1	SatD family protein	-
DK876_RS04490 (DK876_04670)	-	920055..920795 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
DK876_RS04495 (DK876_04675)	-	920860..921297 (+)	438	WP_011922397.1	AAA family ATPase	-
DK876_RS04505 (DK876_04690)	-	922008..922909 (+)	902	Protein_838	Abi family protein	-
DK876_RS04510 (DK876_04695)	xerS	923268..924338 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
DK876_RS04515 (DK876_04700)	-	924408..925916 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
DK876_RS04520 (DK876_04705)	-	925992..926933 (-)	942	WP_012775102.1	sensor histidine kinase	-
DK876_RS04525 (DK876_04710)	braR	926930..927595 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
DK876_RS04530 (DK876_04715)	-	927634..927891 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DK876_RS04535 (DK876_04720)	relB	927875..928126 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=258266 DK876_RS04510 WP_012775101.1 923268..924338(+) (xerS) [Streptococcus suis strain ISU2714]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=258266 DK876_RS04510 WP_012775101.1 923268..924338(+) (xerS) [Streptococcus suis strain ISU2714]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831