Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   BVQ_RS16515 Genome accession   NZ_CP025079
Coordinates   3270021..3270161 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain QST713     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3265021..3275161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVQ_RS16490 (BVQ_16470) - 3265319..3265702 (-) 384 WP_053574130.1 hotdog fold thioesterase -
  BVQ_RS16495 (BVQ_16475) comA 3265724..3266368 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  BVQ_RS16500 (BVQ_16480) - 3266449..3268751 (-) 2303 Protein_3188 histidine kinase -
  BVQ_RS16510 (BVQ_16490) comQ 3268904..3269890 (-) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  BVQ_RS16515 (BVQ_16495) degQ 3270021..3270161 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BVQ_RS16525 (BVQ_16505) - 3270624..3270965 (+) 342 WP_007408677.1 hypothetical protein -
  BVQ_RS16530 (BVQ_16510) - 3270972..3272195 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  BVQ_RS16535 (BVQ_16515) - 3272325..3273791 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  BVQ_RS16540 (BVQ_16520) - 3273809..3274360 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  BVQ_RS16545 (BVQ_16525) - 3274457..3274855 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=258227 BVQ_RS16515 WP_003152043.1 3270021..3270161(-) (degQ) [Bacillus velezensis strain QST713]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=258227 BVQ_RS16515 WP_003152043.1 3270021..3270161(-) (degQ) [Bacillus velezensis strain QST713]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891

Multiple sequence alignment