Detailed information NTG0258157

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DK875_RS04585
• Genome accession: NZ_CP030020
• Coordinates: 950408..951478 (+)
• Length: 356 a.a.
• NCBI ID: WP_002935006.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2514
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 945408..956478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK875_RS04560 (DK875_04770)	-	946136..946468 (+)	333	WP_002935001.1	putative DNA-binding protein	-
DK875_RS04565 (DK875_04775)	ffh	946481..948055 (+)	1575	WP_002935002.1	signal recognition particle protein	-
DK875_RS04570 (DK875_04780)	-	948242..948910 (+)	669	WP_002935003.1	SatD family protein	-
DK875_RS04575 (DK875_04785)	-	948914..949654 (+)	741	WP_002935004.1	DUF3307 domain-containing protein	-
DK875_RS04580 (DK875_04790)	-	949720..950241 (+)	522	WP_002935005.1	AAA family ATPase	-
DK875_RS04585 (DK875_04795)	xerS	950408..951478 (+)	1071	WP_002935006.1	tyrosine recombinase XerS	Machinery gene
DK875_RS04590 (DK875_04800)	-	951548..953056 (-)	1509	WP_013730362.1	phosphoglucomutase	-
DK875_RS04595 (DK875_04805)	-	953132..954073 (-)	942	WP_002935009.1	sensor histidine kinase	-
DK875_RS04600 (DK875_04810)	braR	954070..954735 (-)	666	WP_009909826.1	response regulator transcription factor	Regulator
DK875_RS04605 (DK875_04815)	-	954774..954980 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DK875_RS04610 (DK875_04820)	relB	955021..955260 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41545.71 Da
• Isoelectric Point: 9.2257

>NTDB_id=258157 DK875_RS04585 WP_002935006.1 950408..951478(+) (xerS) [Streptococcus suis strain ISU2514]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=258157 DK875_RS04585 WP_002935006.1 950408..951478(+) (xerS) [Streptococcus suis strain ISU2514]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829