Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CWI64_RS06950 Genome accession   NZ_CP025076
Coordinates   1292380..1293138 (+) Length   252 a.a.
NCBI ID   WP_000410381.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BHN97x     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287380..1298138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS06920 (CWI64_06920) comE 1287979..1288731 (-) 753 WP_000866075.1 competence system response regulator transcription factor ComE Regulator
  CWI64_RS06925 (CWI64_06925) comD/comD1 1288728..1290053 (-) 1326 WP_025169508.1 competence system sensor histidine kinase ComD Regulator
  CWI64_RS06930 (CWI64_06930) comC 1290066..1290197 (-) 132 WP_061649796.1 competence-stimulating peptide ComC Regulator
  CWI64_RS06940 (CWI64_06940) rlmH 1290479..1290958 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CWI64_RS06945 (CWI64_06945) htrA 1291141..1292322 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  CWI64_RS06950 (CWI64_06950) spo0J 1292380..1293138 (+) 759 WP_000410381.1 ParB/RepB/Spo0J family partition protein Regulator
  CWI64_RS06955 (CWI64_06955) dnaA 1293351..1294712 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  CWI64_RS06960 (CWI64_06960) dnaN 1294871..1296007 (+) 1137 WP_000581147.1 DNA polymerase III subunit beta -
  CWI64_RS06965 (CWI64_06965) - 1296072..1296266 (+) 195 WP_000285191.1 DUF951 family protein -
  CWI64_RS06970 (CWI64_06970) ychF 1296350..1297465 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  CWI64_RS06975 (CWI64_06975) pth 1297536..1298105 (+) 570 WP_000163928.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29255.63 Da        Isoelectric Point: 8.9980

>NTDB_id=258109 CWI64_RS06950 WP_000410381.1 1292380..1293138(+) (spo0J) [Streptococcus pneumoniae strain BHN97x]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNYFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIIYFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=258109 CWI64_RS06950 WP_000410381.1 1292380..1293138(+) (spo0J) [Streptococcus pneumoniae strain BHN97x]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATTATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTATTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504

Multiple sequence alignment