Detailed information NTG0258066

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DK235_RS04180
• Genome accession: NZ_CP030017
• Coordinates: 854928..855998 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain ISU1606
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 849928..860998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK235_RS04155 (DK235_04310)	-	851043..851711 (+)	669	WP_011922395.1	SatD family protein	-
DK235_RS04160 (DK235_04315)	-	851715..852455 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
DK235_RS04165 (DK235_04320)	-	852520..852957 (+)	438	WP_011922397.1	AAA family ATPase	-
DK235_RS04175 (DK235_04335)	-	853668..854569 (+)	902	Protein_772	Abi family protein	-
DK235_RS04180 (DK235_04340)	xerS	854928..855998 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
DK235_RS04185 (DK235_04345)	-	856068..857576 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
DK235_RS04190 (DK235_04350)	-	857652..858593 (-)	942	WP_012775102.1	sensor histidine kinase	-
DK235_RS04195 (DK235_04355)	braR	858590..859255 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
DK235_RS04200 (DK235_04360)	-	859294..859551 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DK235_RS04205 (DK235_04365)	relB	859535..859786 (-)	252	WP_053865951.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=258066 DK235_RS04180 WP_012775101.1 854928..855998(+) (xerS) [Streptococcus suis strain ISU1606]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=258066 DK235_RS04180 WP_012775101.1 854928..855998(+) (xerS) [Streptococcus suis strain ISU1606]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831