Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | DK235_RS00360 | Genome accession | NZ_CP030017 |
| Coordinates | 64531..65121 (+) | Length | 196 a.a. |
| NCBI ID | WP_011921679.1 | Uniprot ID | A0A0H3N1H3 |
| Organism | Streptococcus suis strain ISU1606 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 59531..70121
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK235_RS00350 (DK235_00370) | - | 60914..62437 (+) | 1524 | WP_011921677.1 | Heme/copper-type cytochrome/quinol oxidase subunit 1 | - |
| DK235_RS00355 (DK235_00375) | hexB | 62555..64492 (+) | 1938 | WP_012774891.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| DK235_RS00360 (DK235_00380) | ruvA | 64531..65121 (+) | 591 | WP_011921679.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| DK235_RS00365 (DK235_00390) | - | 65846..66415 (+) | 570 | WP_012774893.1 | DNA-3-methyladenine glycosylase I | - |
| DK235_RS00370 (DK235_00395) | cinA | 66452..67633 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| DK235_RS00375 (DK235_00400) | recA | 67685..68836 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| DK235_RS00380 (DK235_00405) | spx | 69072..69470 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| DK235_RS00385 (DK235_00410) | - | 69570..69836 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21739.10 Da Isoelectric Point: 5.0800
>NTDB_id=258024 DK235_RS00360 WP_011921679.1 64531..65121(+) (ruvA) [Streptococcus suis strain ISU1606]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=258024 DK235_RS00360 WP_011921679.1 64531..65121(+) (ruvA) [Streptococcus suis strain ISU1606]
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae D39 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae TIGR4 |
76.142 |
100 |
0.765 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
39.409 |
100 |
0.408 |