Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CWI35_RS10040 | Genome accession | NZ_CP025074 |
| Coordinates | 1923199..1925631 (-) | Length | 810 a.a. |
| NCBI ID | WP_011229593.1 | Uniprot ID | - |
| Organism | [Bacillus] caldolyticus strain NEB414 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1918199..1930631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWI35_RS10020 (CWI35_10000) | ispF | 1919145..1919621 (-) | 477 | WP_119877709.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| CWI35_RS10025 (CWI35_10005) | ispD | 1919636..1920322 (-) | 687 | WP_011229596.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| CWI35_RS10030 (CWI35_10010) | - | 1920344..1921438 (-) | 1095 | WP_011229595.1 | PIN/TRAM domain-containing protein | - |
| CWI35_RS10035 (CWI35_10015) | radA | 1921748..1923121 (-) | 1374 | WP_011229594.1 | DNA repair protein RadA | Machinery gene |
| CWI35_RS10040 (CWI35_10020) | clpC | 1923199..1925631 (-) | 2433 | WP_011229593.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| CWI35_RS10045 (CWI35_10025) | - | 1925628..1926719 (-) | 1092 | WP_011229592.1 | protein arginine kinase | - |
| CWI35_RS10050 (CWI35_10030) | - | 1926725..1927273 (-) | 549 | WP_011229591.1 | UvrB/UvrC motif-containing protein | - |
| CWI35_RS10055 (CWI35_10035) | ctsR | 1927289..1927750 (-) | 462 | WP_011229590.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90280.58 Da Isoelectric Point: 6.4851
>NTDB_id=258024 CWI35_RS10040 WP_011229593.1 1923199..1925631(-) (clpC) [[Bacillus] caldolyticus strain NEB414]
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGSEVSHTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESMSGHGGGASHVST
PTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEACS
KVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAWKEKQGQENLEVTVEDIAAVV
SSWTGIPVSKLAETETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLK
QIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGE
FVVLSKQAVV
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGSEVSHTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESMSGHGGGASHVST
PTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEACS
KVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAWKEKQGQENLEVTVEDIAAVV
SSWTGIPVSKLAETETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLK
QIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGE
FVVLSKQAVV
Nucleotide
Download Length: 2433 bp
>NTDB_id=258024 CWI35_RS10040 WP_011229593.1 1923199..1925631(-) (clpC) [[Bacillus] caldolyticus strain NEB414]
ATGATGTTTGGCAGATTTACGGAACGGGCGCAAAAAGTGCTGGCGCTGGCGCAGGAAGAAGCCATTCGCCTCGGCCATAA
CAATATCGGCACAGAACATATTTTGCTCGGCCTCATCCGCGAGGGCGAGGGGATCGCGGCTAAGGCGCTCATGGCGCTTG
GGCTCGGCCCAGATAAAATTCAAAAAGAAGTCGAATCGCTCATCGGCCGTGGCAGTGAAGTGTCGCATACGATCCACTAT
ACGCCGCGGGCGAAAAAAGTGATTGAGCTGTCGATGGATGAAGCGCGGAAGCTCGGCCATTCATACGTCGGCACAGAACA
TATTTTGCTTGGGTTGATCCGCGAAGGCGAAGGGGTGGCCGCCCGCGTGCTGAACAACTTGGGAGTAAGCTTGAACAAAG
CGCGCCAGCAAGTGTTGCAGCTGCTTGGCAGCAATGAGTCGATGTCAGGCCATGGCGGCGGTGCTTCGCACGTGAGCACT
CCGACGCTTGACAGCCTCGCCCGCGATTTGACAGCGATTGCCCGCGAAGGGCGGCTGGACCCGGTCATCGGCCGCAGTAA
AGAAATTCAGCGCGTCATTGAAGTATTAAGCCGGCGGACGAAAAATAATCCGGTGTTGATCGGCGAGCCGGGCGTTGGGA
AAACGGCCATTGCTGAAGGGTTAGCCCAACAAATCGTCAATAACGAAGTGCCGGAAACGCTGCGCGACAAGCGGGTCATG
ACGCTCGATATGGGGACAGTCGTCGCCGGAACGAAATACCGTGGAGAATTTGAAGACCGACTGAAAAAAGTGATGGATGA
AATTCGTCAAGCGGGCAACATCATCTTGTTTATCGATGAGCTGCATACATTAATTGGCGCCGGTGGGGCGGAAGGAGCGA
TCGACGCGTCGAACATTTTGAAACCGGCGTTGGCGCGCGGGGAGCTTCAATGCATCGGCGCGACAACGCTCGATGAATAC
CGGAAATATATTGAAAAAGACGCCGCGCTTGAACGCCGCTTTCAGCCGATTTACGTTGATGAACCGACAGTGGAAGAATC
GATCCAAATTTTAAAAGGGTTGCGCGATCGGTATGAAGCGCACCACCGCGTTTCGATTTCCGACGAGGCGATCGTGCAAG
CCGTCAAGTTGTCCGACCGCTACATTACCGACCGTTTCTTGCCGGATAAGGCGATCGATTTGATCGACGAGGCTTGCTCG
AAAGTGCGCCTTCGTTCGTTCACCGCACCGCCGAAATTGAAAGAACTTGAACAAAAGCTCGAGGAAGTGCGGAAAGAAAA
AGACGCGGCCGTGCAAAGCCAAGAGTTTGAGAAAGCGGCGTCGCTGCGCGATATGGAACAGCGGCTGCGCGAAGAACTGG
AGGAAACGAAACGTGCGTGGAAAGAAAAACAAGGCCAAGAAAATTTGGAAGTGACGGTCGAAGACATCGCCGCGGTCGTC
TCGAGTTGGACCGGCATTCCGGTATCGAAGCTCGCTGAGACGGAAACGGAGCGGCTGCTCAAGCTGGAAGAAATTTTGCA
TTCGCGTGTCGTCGGCCAAGACGAGGCGGTCAAAGCGGTCGCCAAAGCGGTGCGCCGCGCCCGTGCTGGCCTGAAAGACC
CGAAACGCCCGATCGGTTCGTTCATTTTCCTTGGTCCGACCGGGGTTGGGAAAACGGAGTTGGCTCGAGCCTTGGCAGAA
GCGATGTTTGGCGATGAAGACGCCCTCATTCGCATCGATATGTCCGAGTATATGGAAAAACACTCGACATCGCGGCTCAT
CGGGTCGCCGCCGGGGTATGTCGGTTATGAAGAAGGCGGCCAGCTGACGGAAAAAGTGCGCCGCAAGCCGTATTCGGTTG
TCCTGTTAGATGAGATGGAAAAAGCGCATCCGGACGTGTTCAATATTTTGCTGCAAGTGTTGGAAGATGGGCGGCTGACT
GACTCGAAAGGGCGGACGGTCGACTTCCGCAACACGATCATCATCATGACGTCCAACGTCGGCGCCGATGCGCTGAAACG
GAATAAGTACGTTGGCTTCAACATTCAAGACGGGAACCAGCAATACAAAGATATGAAAAGCAAAGTGATGGATGAGCTGA
AAAAAGCATTCCGTCCAGAGTTTTTAAACCGGATCGACGAAATCATCGTCTTCCATTCGCTCGAAAAAGACCATCTGAAA
CAAATCGTCCGATTGATGGCCGATACGCTCGTGAAGCGGCTGAAAGAGCAAGACATTGATCTTGAGCTGACGGAGGCCGC
CATTGAGAAAATCGCCGCCGAAGGGTTCGATCCAGAATACGGTGCCCGCCCGCTGCGCCGCGCCTTGCAAAAGCATGTTG
AAGACCGTTTGTCCGAAGAATTGTTAAAAGGCACGATCGCCAAAGGGCAAAAAGTCGTCGTGGATGTCAAAGACGGGGAG
TTTGTCGTATTGTCGAAACAAGCGGTCGTGTGA
ATGATGTTTGGCAGATTTACGGAACGGGCGCAAAAAGTGCTGGCGCTGGCGCAGGAAGAAGCCATTCGCCTCGGCCATAA
CAATATCGGCACAGAACATATTTTGCTCGGCCTCATCCGCGAGGGCGAGGGGATCGCGGCTAAGGCGCTCATGGCGCTTG
GGCTCGGCCCAGATAAAATTCAAAAAGAAGTCGAATCGCTCATCGGCCGTGGCAGTGAAGTGTCGCATACGATCCACTAT
ACGCCGCGGGCGAAAAAAGTGATTGAGCTGTCGATGGATGAAGCGCGGAAGCTCGGCCATTCATACGTCGGCACAGAACA
TATTTTGCTTGGGTTGATCCGCGAAGGCGAAGGGGTGGCCGCCCGCGTGCTGAACAACTTGGGAGTAAGCTTGAACAAAG
CGCGCCAGCAAGTGTTGCAGCTGCTTGGCAGCAATGAGTCGATGTCAGGCCATGGCGGCGGTGCTTCGCACGTGAGCACT
CCGACGCTTGACAGCCTCGCCCGCGATTTGACAGCGATTGCCCGCGAAGGGCGGCTGGACCCGGTCATCGGCCGCAGTAA
AGAAATTCAGCGCGTCATTGAAGTATTAAGCCGGCGGACGAAAAATAATCCGGTGTTGATCGGCGAGCCGGGCGTTGGGA
AAACGGCCATTGCTGAAGGGTTAGCCCAACAAATCGTCAATAACGAAGTGCCGGAAACGCTGCGCGACAAGCGGGTCATG
ACGCTCGATATGGGGACAGTCGTCGCCGGAACGAAATACCGTGGAGAATTTGAAGACCGACTGAAAAAAGTGATGGATGA
AATTCGTCAAGCGGGCAACATCATCTTGTTTATCGATGAGCTGCATACATTAATTGGCGCCGGTGGGGCGGAAGGAGCGA
TCGACGCGTCGAACATTTTGAAACCGGCGTTGGCGCGCGGGGAGCTTCAATGCATCGGCGCGACAACGCTCGATGAATAC
CGGAAATATATTGAAAAAGACGCCGCGCTTGAACGCCGCTTTCAGCCGATTTACGTTGATGAACCGACAGTGGAAGAATC
GATCCAAATTTTAAAAGGGTTGCGCGATCGGTATGAAGCGCACCACCGCGTTTCGATTTCCGACGAGGCGATCGTGCAAG
CCGTCAAGTTGTCCGACCGCTACATTACCGACCGTTTCTTGCCGGATAAGGCGATCGATTTGATCGACGAGGCTTGCTCG
AAAGTGCGCCTTCGTTCGTTCACCGCACCGCCGAAATTGAAAGAACTTGAACAAAAGCTCGAGGAAGTGCGGAAAGAAAA
AGACGCGGCCGTGCAAAGCCAAGAGTTTGAGAAAGCGGCGTCGCTGCGCGATATGGAACAGCGGCTGCGCGAAGAACTGG
AGGAAACGAAACGTGCGTGGAAAGAAAAACAAGGCCAAGAAAATTTGGAAGTGACGGTCGAAGACATCGCCGCGGTCGTC
TCGAGTTGGACCGGCATTCCGGTATCGAAGCTCGCTGAGACGGAAACGGAGCGGCTGCTCAAGCTGGAAGAAATTTTGCA
TTCGCGTGTCGTCGGCCAAGACGAGGCGGTCAAAGCGGTCGCCAAAGCGGTGCGCCGCGCCCGTGCTGGCCTGAAAGACC
CGAAACGCCCGATCGGTTCGTTCATTTTCCTTGGTCCGACCGGGGTTGGGAAAACGGAGTTGGCTCGAGCCTTGGCAGAA
GCGATGTTTGGCGATGAAGACGCCCTCATTCGCATCGATATGTCCGAGTATATGGAAAAACACTCGACATCGCGGCTCAT
CGGGTCGCCGCCGGGGTATGTCGGTTATGAAGAAGGCGGCCAGCTGACGGAAAAAGTGCGCCGCAAGCCGTATTCGGTTG
TCCTGTTAGATGAGATGGAAAAAGCGCATCCGGACGTGTTCAATATTTTGCTGCAAGTGTTGGAAGATGGGCGGCTGACT
GACTCGAAAGGGCGGACGGTCGACTTCCGCAACACGATCATCATCATGACGTCCAACGTCGGCGCCGATGCGCTGAAACG
GAATAAGTACGTTGGCTTCAACATTCAAGACGGGAACCAGCAATACAAAGATATGAAAAGCAAAGTGATGGATGAGCTGA
AAAAAGCATTCCGTCCAGAGTTTTTAAACCGGATCGACGAAATCATCGTCTTCCATTCGCTCGAAAAAGACCATCTGAAA
CAAATCGTCCGATTGATGGCCGATACGCTCGTGAAGCGGCTGAAAGAGCAAGACATTGATCTTGAGCTGACGGAGGCCGC
CATTGAGAAAATCGCCGCCGAAGGGTTCGATCCAGAATACGGTGCCCGCCCGCTGCGCCGCGCCTTGCAAAAGCATGTTG
AAGACCGTTTGTCCGAAGAATTGTTAAAAGGCACGATCGCCAAAGGGCAAAAAGTCGTCGTGGATGTCAAAGACGGGGAG
TTTGTCGTATTGTCGAAACAAGCGGTCGTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
87.298 |
99.136 |
0.865 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.998 |
99.012 |
0.505 |
| clpC | Streptococcus thermophilus LMD-9 |
46.86 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.498 |
100 |
0.475 |
| clpC | Streptococcus mutans UA159 |
45.411 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae D39 |
46.106 |
99.877 |
0.46 |
| clpC | Streptococcus pneumoniae Rx1 |
46.106 |
99.877 |
0.46 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.983 |
99.877 |
0.459 |
| clpE | Streptococcus mutans UA159 |
53.495 |
81.235 |
0.435 |
| clpE | Streptococcus pneumoniae R6 |
52.259 |
81.975 |
0.428 |
| clpE | Streptococcus pneumoniae Rx1 |
52.259 |
81.975 |
0.428 |
| clpE | Streptococcus pneumoniae D39 |
52.259 |
81.975 |
0.428 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.187 |
81.852 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.64 |
79.506 |
0.419 |