Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CWI35_RS05020 Genome accession   NZ_CP025074
Coordinates   959732..960166 (+) Length   144 a.a.
NCBI ID   WP_014195334.1    Uniprot ID   A0A7U9EXV8
Organism   [Bacillus] caldolyticus strain NEB414     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 954732..965166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI35_RS04990 (CWI35_04980) cbpB 955255..955728 (-) 474 WP_011230548.1 cyclic-di-AMP-binding protein CbpB -
  CWI35_RS04995 (CWI35_04985) abbA 955831..956034 (-) 204 WP_013145903.1 antirepressor AbbA -
  CWI35_RS05000 (CWI35_04990) - 956160..956393 (-) 234 WP_011230546.1 hypothetical protein -
  CWI35_RS05005 (CWI35_04995) - 956442..957659 (-) 1218 WP_011230545.1 EAL-associated domain-containing protein -
  CWI35_RS05010 (CWI35_05000) fadH 957876..958643 (-) 768 WP_013523307.1 2,4-dienoyl-CoA reductase -
  CWI35_RS05015 (CWI35_05005) - 958787..959656 (+) 870 WP_020278634.1 metallophosphoesterase -
  CWI35_RS05020 (CWI35_05010) kre 959732..960166 (+) 435 WP_014195334.1 YkyB family protein Regulator
  CWI35_RS05025 (CWI35_05015) - 960472..961881 (-) 1410 WP_033025011.1 glycosyltransferase -
  CWI35_RS05030 (CWI35_05020) - 961878..962900 (-) 1023 WP_119877534.1 HEAT repeat domain-containing protein -
  CWI35_RS05035 (CWI35_05025) - 962900..964528 (-) 1629 WP_031212924.1 diguanylate cyclase -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16401.18 Da        Isoelectric Point: 10.6793

>NTDB_id=258011 CWI35_RS05020 WP_014195334.1 959732..960166(+) (kre) [[Bacillus] caldolyticus strain NEB414]
MKPVQLTVDNIAKAIFTVNRHAKTALNPSFLYLLKKKAIEKLLEEGKAKKVGLHFSRNPRYSQQQSDVLVAVGDYYFHIP
PTKQDFAALPHLGSLNDSYRNPPARMPLSEAKAILIAYTGLKEKPEQKPKRLTRPVFKRLGDRY

Nucleotide


Download         Length: 435 bp        

>NTDB_id=258011 CWI35_RS05020 WP_014195334.1 959732..960166(+) (kre) [[Bacillus] caldolyticus strain NEB414]
ATGAAACCGGTGCAATTGACGGTCGACAATATTGCCAAAGCGATTTTTACCGTCAACCGCCATGCCAAAACAGCATTGAA
CCCTTCGTTTCTTTATCTTCTGAAGAAAAAAGCGATCGAGAAGCTGCTTGAGGAGGGCAAGGCGAAAAAAGTGGGCCTCC
ATTTTTCCCGCAATCCGAGATACAGCCAACAGCAATCCGACGTGCTTGTCGCCGTCGGCGACTACTACTTCCACATCCCA
CCGACAAAACAAGATTTCGCCGCCCTTCCGCACCTTGGCTCTCTCAACGATTCATACCGCAACCCTCCAGCTCGGATGCC
GCTGTCAGAGGCAAAAGCCATTCTCATCGCCTACACCGGACTGAAGGAAAAGCCGGAACAAAAGCCGAAACGGCTGACAA
GACCCGTATTTAAACGGCTCGGCGACCGCTATTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(8-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U9EXV8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.265

100

0.646

Multiple sequence alignment