Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A7J09_RS10005 Genome accession   NZ_CP030015
Coordinates   2078375..2079151 (-) Length   258 a.a.
NCBI ID   WP_029178844.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2073375..2084151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS09985 (A7J09_10185) - 2074607..2075437 (-) 831 WP_024381444.1 amino acid ABC transporter substrate-binding protein -
  A7J09_RS09990 (A7J09_10190) - 2075464..2076096 (-) 633 WP_009909533.1 amino acid ABC transporter ATP-binding protein -
  A7J09_RS09995 (A7J09_10195) - 2076106..2076747 (-) 642 WP_024394531.1 amino acid ABC transporter permease -
  A7J09_RS10000 (A7J09_10200) - 2076945..2078108 (+) 1164 WP_148124301.1 IS30 family transposase -
  A7J09_RS10005 (A7J09_10205) recX 2078375..2079151 (-) 777 WP_029178844.1 recombination regulator RecX Regulator
  A7J09_RS10010 (A7J09_10210) rlmD 2079189..2080541 (+) 1353 WP_012775501.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  A7J09_RS10015 - 2080826..2081029 (+) 204 Protein_1950 transposase -
  A7J09_RS10020 (A7J09_10220) - 2081158..2082413 (+) 1256 WP_172411187.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30362.92 Da        Isoelectric Point: 8.8789

>NTDB_id=257993 A7J09_RS10005 WP_029178844.1 2078375..2079151(-) (recX) [Streptococcus suis strain ISU2812]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFCELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKLLIDKRLAEEDFSELAGKIGEK
LVGIYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYR

Nucleotide


Download         Length: 777 bp        

>NTDB_id=257993 A7J09_RS10005 WP_029178844.1 2078375..2079151(-) (recX) [Streptococcus suis strain ISU2812]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTTGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTTAAGATAGTGACGGTACTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTCCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACTGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAA
TTGGTGGGTATATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGGAAGGGTTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCGGTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368