Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CWI23_RS25340 | Genome accession | NZ_CP025051 |
| Coordinates | 5261091..5261648 (+) | Length | 185 a.a. |
| NCBI ID | WP_003119423.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain PB353 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5256091..5266648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWI23_RS25320 (CWI23_25320) | pilR | 5257367..5258704 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| CWI23_RS25325 (CWI23_25325) | thiO | 5258750..5259844 (-) | 1095 | WP_034029886.1 | glycine oxidase ThiO | - |
| CWI23_RS25330 (CWI23_25330) | - | 5259979..5260488 (+) | 510 | WP_100882908.1 | GspH/FimT family pseudopilin | - |
| CWI23_RS25335 (CWI23_25335) | - | 5260594..5261100 (+) | 507 | WP_003102598.1 | GspH/FimT family pseudopilin | - |
| CWI23_RS25340 (CWI23_25340) | pilV | 5261091..5261648 (+) | 558 | WP_003119423.1 | type 4a pilus minor pilin PilV | Machinery gene |
| CWI23_RS25345 (CWI23_25345) | pilW | 5261645..5262469 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| CWI23_RS25350 (CWI23_25350) | pilX | 5262466..5263053 (+) | 588 | WP_003112826.1 | type 4a pilus minor pilin PilX | - |
| CWI23_RS25355 (CWI23_25355) | pilY1 | 5263065..5266550 (+) | 3486 | WP_100882909.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20061.15 Da Isoelectric Point: 8.2255
>NTDB_id=257785 CWI23_RS25340 WP_003119423.1 5261091..5261648(+) (pilV) [Pseudomonas aeruginosa strain PB353]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=257785 CWI23_RS25340 WP_003119423.1 5261091..5261648(+) (pilV) [Pseudomonas aeruginosa strain PB353]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
99.459 |
100 |
0.995 |