Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CWI26_RS10120 Genome accession   NZ_CP025043
Coordinates   2043519..2044253 (-) Length   244 a.a.
NCBI ID   WP_024409526.1    Uniprot ID   A0A0Z8G2F7
Organism   Streptococcus suis strain AH681     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2038519..2049253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS10090 (CWI26_10090) rnpM 2038734..2039030 (-) 297 WP_002942375.1 RNase P modulator RnpM -
  CWI26_RS10095 (CWI26_10095) nusA 2039047..2040201 (-) 1155 WP_099876915.1 transcription termination factor NusA -
  CWI26_RS10100 (CWI26_10100) rimP 2040275..2040745 (-) 471 WP_100881704.1 ribosome maturation factor RimP -
  CWI26_RS10105 (CWI26_10105) trmB 2041006..2041641 (-) 636 WP_053864083.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CWI26_RS10110 (CWI26_10110) ccrZ 2041638..2042432 (-) 795 WP_024409528.1 cell cycle regulator CcrZ -
  CWI26_RS10115 (CWI26_10115) - 2042482..2043522 (-) 1041 WP_024409527.1 ABC transporter permease -
  CWI26_RS10120 (CWI26_10120) pptA 2043519..2044253 (-) 735 WP_024409526.1 ABC transporter ATP-binding protein Regulator
  CWI26_RS10125 (CWI26_10125) - 2044316..2044729 (+) 414 WP_024376433.1 HIT family protein -
  CWI26_RS10130 (CWI26_10130) - 2044731..2045060 (+) 330 WP_044759511.1 hypothetical protein -
  CWI26_RS10140 (CWI26_10140) - 2045575..2046768 (-) 1194 WP_029944194.1 LCP family protein -
  CWI26_RS10145 (CWI26_10145) - 2046765..2047292 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  CWI26_RS10150 (CWI26_10150) tsaE 2047285..2047725 (-) 441 WP_032511687.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26846.13 Da        Isoelectric Point: 4.3606

>NTDB_id=257626 CWI26_RS10120 WP_024409526.1 2043519..2044253(-) (pptA) [Streptococcus suis strain AH681]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRIEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=257626 CWI26_RS10120 WP_024409526.1 2043519..2044253(-) (pptA) [Streptococcus suis strain AH681]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACACCTT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAACTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAGGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTATTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8G2F7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721

Multiple sequence alignment