Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   CWI26_RS01245 Genome accession   NZ_CP025043
Coordinates   237894..238607 (+) Length   237 a.a.
NCBI ID   WP_024378075.1    Uniprot ID   A0A0N0DM09
Organism   Streptococcus suis strain AH681     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 232894..243607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS01230 (CWI26_01230) - 232907..233557 (-) 651 WP_158293387.1 TetR/AcrR family transcriptional regulator -
  CWI26_RS01235 (CWI26_01235) treC 233639..235264 (-) 1626 WP_100881078.1 alpha,alpha-phosphotrehalase -
  CWI26_RS01240 (CWI26_01240) treP 235667..237661 (-) 1995 WP_100881079.1 PTS system trehalose-specific EIIBC component -
  CWI26_RS01245 (CWI26_01245) treR 237894..238607 (+) 714 WP_024378075.1 trehalose operon repressor Regulator
  CWI26_RS01250 (CWI26_01250) - 238665..238976 (+) 312 WP_002935948.1 hypothetical protein -
  CWI26_RS01255 (CWI26_01255) - 238973..239521 (+) 549 WP_044672844.1 CvpA family protein -
  CWI26_RS01270 (CWI26_01270) - 240127..242460 (+) 2334 WP_024378072.1 endonuclease MutS2 -
  CWI26_RS12135 - 242493..242891 (-) 399 WP_024378071.1 hypothetical protein -
  CWI26_RS01280 (CWI26_01280) - 243115..243342 (+) 228 WP_024378070.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27213.11 Da        Isoelectric Point: 6.7419

>NTDB_id=257597 CWI26_RS01245 WP_024378075.1 237894..238607(+) (treR) [Streptococcus suis strain AH681]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTSREERDLMQIQDDYLVLIKSRVYLGDTRQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=257597 CWI26_RS01245 WP_024378075.1 237894..238607(+) (treR) [Streptococcus suis strain AH681]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAGCAGCTTCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCACTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGACATTGCTTATGCACAGAAAGAGATTACGGTAGAGCCGACCAGCCGAGAAGA
ACGAGATTTGATGCAGATTCAGGATGATTATCTGGTGTTGATAAAATCCAGGGTCTACTTAGGAGATACGCGACAATTTC
AATACACTGAAAGTAAGCACAAGATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0N0DM09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.137

98.734

0.515

Multiple sequence alignment